Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC23.74■■□□□ 1.39
TTC28Q96AY4 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TTC28Q96AY4 AC073210.2-201ENST00000430369 194 ntBASIC23.74■■□□□ 1.39
TTC28Q96AY4 FAM201B-201ENST00000458407 597 ntBASIC23.74■■□□□ 1.39
TTC28Q96AY4 IGHV3-19-201ENST00000521488 291 ntBASIC23.74■■□□□ 1.39
TTC28Q96AY4 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
TTC28Q96AY4 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
TTC28Q96AY4 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
TTC28Q96AY4 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC23.73■■□□□ 1.39
TTC28Q96AY4 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TTC28Q96AY4 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC23.73■■□□□ 1.39
TTC28Q96AY4 AP005435.1-201ENST00000529293 1178 ntBASIC23.73■■□□□ 1.39
TTC28Q96AY4 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TTC28Q96AY4 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TTC28Q96AY4 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC23.73■■□□□ 1.39
TTC28Q96AY4 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC23.73■■□□□ 1.39
TTC28Q96AY4 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TTC28Q96AY4 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TTC28Q96AY4 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC23.72■■□□□ 1.39
TTC28Q96AY4 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC23.72■■□□□ 1.39
TTC28Q96AY4 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TTC28Q96AY4 GUSBP6-202ENST00000438529 1198 ntBASIC23.72■■□□□ 1.39
TTC28Q96AY4 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TTC28Q96AY4 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TTC28Q96AY4 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
TTC28Q96AY4 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TTC28Q96AY4 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TTC28Q96AY4 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC23.71■■□□□ 1.39
TTC28Q96AY4 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC23.71■■□□□ 1.39
TTC28Q96AY4 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC23.71■■□□□ 1.39
TTC28Q96AY4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.7■■□□□ 1.39
TTC28Q96AY4 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
TTC28Q96AY4 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TTC28Q96AY4 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
TTC28Q96AY4 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC23.7■■□□□ 1.38
TTC28Q96AY4 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC23.7■■□□□ 1.38
TTC28Q96AY4 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TTC28Q96AY4 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC23.69■■□□□ 1.38
TTC28Q96AY4 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TTC28Q96AY4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.69■■□□□ 1.38
TTC28Q96AY4 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC23.69■■□□□ 1.38
TTC28Q96AY4 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
TTC28Q96AY4 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TTC28Q96AY4 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TTC28Q96AY4 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC23.69■■□□□ 1.38
TTC28Q96AY4 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
TTC28Q96AY4 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
TTC28Q96AY4 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TTC28Q96AY4 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
TTC28Q96AY4 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TTC28Q96AY4 FOXO3B-201ENST00000395675 1928 ntBASIC23.68■■□□□ 1.38
TTC28Q96AY4 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
TTC28Q96AY4 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.67■■□□□ 1.38
TTC28Q96AY4 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
TTC28Q96AY4 GALNS-213ENST00000569433 723 ntTSL 3 BASIC23.67■■□□□ 1.38
TTC28Q96AY4 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TTC28Q96AY4 AP004607.4-201ENST00000530158 1459 ntBASIC23.67■■□□□ 1.38
TTC28Q96AY4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC23.67■■□□□ 1.38
TTC28Q96AY4 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC23.67■■□□□ 1.38
TTC28Q96AY4 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TTC28Q96AY4 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TTC28Q96AY4 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC23.66■■□□□ 1.38
TTC28Q96AY4 LINC02228-203ENST00000641970 1355 ntBASIC23.66■■□□□ 1.38
TTC28Q96AY4 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC23.66■■□□□ 1.38
TTC28Q96AY4 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
TTC28Q96AY4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC23.66■■□□□ 1.38
TTC28Q96AY4 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TTC28Q96AY4 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.65■■□□□ 1.38
TTC28Q96AY4 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
TTC28Q96AY4 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TTC28Q96AY4 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.65■■□□□ 1.38
TTC28Q96AY4 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TTC28Q96AY4 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TTC28Q96AY4 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TTC28Q96AY4 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.65■■□□□ 1.38
TTC28Q96AY4 POU5F1P3-201ENST00000428824 1078 ntBASIC23.65■■□□□ 1.38
TTC28Q96AY4 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC23.64■■□□□ 1.37
TTC28Q96AY4 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
TTC28Q96AY4 AL138781.1-201ENST00000566567 1274 ntBASIC23.64■■□□□ 1.37
TTC28Q96AY4 ITM2C-210ENST00000620962 501 ntBASIC23.64■■□□□ 1.37
TTC28Q96AY4 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TTC28Q96AY4 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TTC28Q96AY4 AC004854.2-201ENST00000608450 1441 ntBASIC23.63■■□□□ 1.37
TTC28Q96AY4 SMUG1P1-201ENST00000590640 811 ntBASIC23.63■■□□□ 1.37
TTC28Q96AY4 MDK-213ENST00000617138 635 ntTSL 2 BASIC23.63■■□□□ 1.37
TTC28Q96AY4 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
TTC28Q96AY4 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC23.62■■□□□ 1.37
TTC28Q96AY4 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TTC28Q96AY4 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC23.61■■□□□ 1.37
TTC28Q96AY4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC23.61■■□□□ 1.37
TTC28Q96AY4 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.61■■□□□ 1.37
TTC28Q96AY4 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TTC28Q96AY4 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TTC28Q96AY4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TTC28Q96AY4 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
TTC28Q96AY4 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TTC28Q96AY4 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TTC28Q96AY4 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
TTC28Q96AY4 AC083906.2-201ENST00000511578 360 ntBASIC23.6■■□□□ 1.37
TTC28Q96AY4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms