Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
ATP6V0A1Q93050 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
ATP6V0A1Q93050 TMEM202-AS1-202ENST00000565181 2325 ntBASIC25.59■■□□□ 1.69
ATP6V0A1Q93050 GATM-206ENST00000558336 1522 ntTSL 2 BASIC25.59■■□□□ 1.69
ATP6V0A1Q93050 EBPL-204ENST00000378272 766 ntTSL 3 BASIC25.59■■□□□ 1.69
ATP6V0A1Q93050 AC142381.2-201ENST00000566120 298 ntBASIC25.59■■□□□ 1.69
ATP6V0A1Q93050 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC25.59■■□□□ 1.69
ATP6V0A1Q93050 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
ATP6V0A1Q93050 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
ATP6V0A1Q93050 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
ATP6V0A1Q93050 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
ATP6V0A1Q93050 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
ATP6V0A1Q93050 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC25.58■■□□□ 1.69
ATP6V0A1Q93050 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
ATP6V0A1Q93050 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
ATP6V0A1Q93050 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
ATP6V0A1Q93050 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
ATP6V0A1Q93050 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC25.58■■□□□ 1.69
ATP6V0A1Q93050 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC25.58■■□□□ 1.69
ATP6V0A1Q93050 AC135279.3-201ENST00000610945 1311 ntBASIC25.58■■□□□ 1.69
ATP6V0A1Q93050 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
ATP6V0A1Q93050 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
ATP6V0A1Q93050 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
ATP6V0A1Q93050 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
ATP6V0A1Q93050 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC25.57■■□□□ 1.68
ATP6V0A1Q93050 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC25.57■■□□□ 1.68
ATP6V0A1Q93050 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
ATP6V0A1Q93050 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
ATP6V0A1Q93050 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
ATP6V0A1Q93050 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
ATP6V0A1Q93050 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC25.56■■□□□ 1.68
ATP6V0A1Q93050 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
ATP6V0A1Q93050 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC25.56■■□□□ 1.68
ATP6V0A1Q93050 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC25.56■■□□□ 1.68
ATP6V0A1Q93050 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
ATP6V0A1Q93050 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
ATP6V0A1Q93050 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC25.55■■□□□ 1.68
ATP6V0A1Q93050 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
ATP6V0A1Q93050 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
ATP6V0A1Q93050 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
ATP6V0A1Q93050 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC25.55■■□□□ 1.68
ATP6V0A1Q93050 AC024257.2-201ENST00000549699 147 ntBASIC25.55■■□□□ 1.68
ATP6V0A1Q93050 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
ATP6V0A1Q93050 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
ATP6V0A1Q93050 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
ATP6V0A1Q93050 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC25.54■■□□□ 1.68
ATP6V0A1Q93050 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
ATP6V0A1Q93050 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
ATP6V0A1Q93050 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC25.54■■□□□ 1.68
ATP6V0A1Q93050 GUK1-205ENST00000366722 850 ntTSL 3 BASIC25.54■■□□□ 1.68
ATP6V0A1Q93050 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC25.54■■□□□ 1.68
ATP6V0A1Q93050 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
ATP6V0A1Q93050 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
ATP6V0A1Q93050 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
ATP6V0A1Q93050 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
ATP6V0A1Q93050 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
ATP6V0A1Q93050 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ATP6V0A1Q93050 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ATP6V0A1Q93050 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
ATP6V0A1Q93050 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
ATP6V0A1Q93050 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
ATP6V0A1Q93050 ZNRF2P3-201ENST00000424200 374 ntBASIC25.53■■□□□ 1.68
ATP6V0A1Q93050 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
ATP6V0A1Q93050 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC25.53■■□□□ 1.68
ATP6V0A1Q93050 AL031432.3-201ENST00000607698 485 ntBASIC25.53■■□□□ 1.68
ATP6V0A1Q93050 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
ATP6V0A1Q93050 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
ATP6V0A1Q93050 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC25.53■■□□□ 1.68
ATP6V0A1Q93050 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
ATP6V0A1Q93050 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
ATP6V0A1Q93050 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC25.52■■□□□ 1.68
ATP6V0A1Q93050 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
ATP6V0A1Q93050 ALDH1A3-203ENST00000557963 1670 ntBASIC25.52■■□□□ 1.68
ATP6V0A1Q93050 SUDS3P1-201ENST00000505831 966 ntBASIC25.52■■□□□ 1.68
ATP6V0A1Q93050 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC25.52■■□□□ 1.68
ATP6V0A1Q93050 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
ATP6V0A1Q93050 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
ATP6V0A1Q93050 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
ATP6V0A1Q93050 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
ATP6V0A1Q93050 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
ATP6V0A1Q93050 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
ATP6V0A1Q93050 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
ATP6V0A1Q93050 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC25.51■■□□□ 1.67
ATP6V0A1Q93050 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC25.51■■□□□ 1.67
ATP6V0A1Q93050 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
ATP6V0A1Q93050 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
ATP6V0A1Q93050 EDA-201ENST00000338901 1233 ntBASIC25.5■■□□□ 1.67
ATP6V0A1Q93050 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
ATP6V0A1Q93050 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
ATP6V0A1Q93050 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
ATP6V0A1Q93050 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC25.5■■□□□ 1.67
ATP6V0A1Q93050 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
ATP6V0A1Q93050 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC25.49■■□□□ 1.67
ATP6V0A1Q93050 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
ATP6V0A1Q93050 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
ATP6V0A1Q93050 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC25.49■■□□□ 1.67
ATP6V0A1Q93050 AL355001.2-201ENST00000620617 1191 ntBASIC25.49■■□□□ 1.67
ATP6V0A1Q93050 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
ATP6V0A1Q93050 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
ATP6V0A1Q93050 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 229.7 ms