Protein–RNA interactions for Protein: Q8NEZ2

VPS37A, Vacuolar protein sorting-associated protein 37A, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37AQ8NEZ2 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
VPS37AQ8NEZ2 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VPS37AQ8NEZ2 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
VPS37AQ8NEZ2 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VPS37AQ8NEZ2 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VPS37AQ8NEZ2 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
VPS37AQ8NEZ2 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VPS37AQ8NEZ2 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.63■■□□□ 1.05
VPS37AQ8NEZ2 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
VPS37AQ8NEZ2 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
VPS37AQ8NEZ2 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
VPS37AQ8NEZ2 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
VPS37AQ8NEZ2 BHLHE23-202ENST00000612929 1109 ntBASIC21.62■■□□□ 1.05
VPS37AQ8NEZ2 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.62■■□□□ 1.05
VPS37AQ8NEZ2 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
VPS37AQ8NEZ2 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
VPS37AQ8NEZ2 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
VPS37AQ8NEZ2 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
VPS37AQ8NEZ2 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VPS37AQ8NEZ2 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.61■■□□□ 1.05
VPS37AQ8NEZ2 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.61■■□□□ 1.05
VPS37AQ8NEZ2 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
VPS37AQ8NEZ2 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.61■■□□□ 1.05
VPS37AQ8NEZ2 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
VPS37AQ8NEZ2 DUX4L18-201ENST00000553347 1267 ntBASIC21.61■■□□□ 1.05
VPS37AQ8NEZ2 AC074183.2-201ENST00000623112 922 ntBASIC21.61■■□□□ 1.05
VPS37AQ8NEZ2 ANOS2P-203ENST00000472227 1816 ntBASIC21.61■■□□□ 1.05
VPS37AQ8NEZ2 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.61■■□□□ 1.05
VPS37AQ8NEZ2 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VPS37AQ8NEZ2 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
VPS37AQ8NEZ2 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
VPS37AQ8NEZ2 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.6■■□□□ 1.05
VPS37AQ8NEZ2 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VPS37AQ8NEZ2 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VPS37AQ8NEZ2 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.59■■□□□ 1.05
VPS37AQ8NEZ2 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
VPS37AQ8NEZ2 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
VPS37AQ8NEZ2 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
VPS37AQ8NEZ2 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.59■■□□□ 1.05
VPS37AQ8NEZ2 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
VPS37AQ8NEZ2 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VPS37AQ8NEZ2 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.59■■□□□ 1.05
VPS37AQ8NEZ2 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
VPS37AQ8NEZ2 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
VPS37AQ8NEZ2 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
VPS37AQ8NEZ2 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
VPS37AQ8NEZ2 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
VPS37AQ8NEZ2 AC092068.2-201ENST00000590491 1708 ntBASIC21.58■■□□□ 1.05
VPS37AQ8NEZ2 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
VPS37AQ8NEZ2 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
VPS37AQ8NEZ2 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
VPS37AQ8NEZ2 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
VPS37AQ8NEZ2 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.57■■□□□ 1.04
VPS37AQ8NEZ2 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
VPS37AQ8NEZ2 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.57■■□□□ 1.04
VPS37AQ8NEZ2 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
VPS37AQ8NEZ2 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
VPS37AQ8NEZ2 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
VPS37AQ8NEZ2 ALDH1A3-203ENST00000557963 1670 ntBASIC21.56■■□□□ 1.04
VPS37AQ8NEZ2 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.56■■□□□ 1.04
VPS37AQ8NEZ2 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
VPS37AQ8NEZ2 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.56■■□□□ 1.04
VPS37AQ8NEZ2 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.56■■□□□ 1.04
VPS37AQ8NEZ2 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
VPS37AQ8NEZ2 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.56■■□□□ 1.04
VPS37AQ8NEZ2 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
VPS37AQ8NEZ2 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
VPS37AQ8NEZ2 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
VPS37AQ8NEZ2 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
VPS37AQ8NEZ2 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VPS37AQ8NEZ2 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
VPS37AQ8NEZ2 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
VPS37AQ8NEZ2 AC131274.2-201ENST00000580697 1507 ntBASIC21.55■■□□□ 1.04
VPS37AQ8NEZ2 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
VPS37AQ8NEZ2 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.55■■□□□ 1.04
VPS37AQ8NEZ2 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VPS37AQ8NEZ2 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VPS37AQ8NEZ2 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VPS37AQ8NEZ2 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.55■■□□□ 1.04
VPS37AQ8NEZ2 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VPS37AQ8NEZ2 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VPS37AQ8NEZ2 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.55■■□□□ 1.04
VPS37AQ8NEZ2 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.55■■□□□ 1.04
VPS37AQ8NEZ2 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
VPS37AQ8NEZ2 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VPS37AQ8NEZ2 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VPS37AQ8NEZ2 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.55■■□□□ 1.04
VPS37AQ8NEZ2 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
VPS37AQ8NEZ2 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
VPS37AQ8NEZ2 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
VPS37AQ8NEZ2 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
VPS37AQ8NEZ2 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VPS37AQ8NEZ2 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
VPS37AQ8NEZ2 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
VPS37AQ8NEZ2 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
VPS37AQ8NEZ2 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VPS37AQ8NEZ2 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VPS37AQ8NEZ2 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VPS37AQ8NEZ2 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.53■■□□□ 1.04
VPS37AQ8NEZ2 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms