Protein–RNA interactions for Protein: Q8NEP9

ZNF555, Zinc finger protein 555, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF555Q8NEP9 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.09■□□□□ 0.97
ZNF555Q8NEP9 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF555Q8NEP9 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.09■□□□□ 0.97
ZNF555Q8NEP9 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF555Q8NEP9 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF555Q8NEP9 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
ZNF555Q8NEP9 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF555Q8NEP9 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF555Q8NEP9 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ZNF555Q8NEP9 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ZNF555Q8NEP9 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ZNF555Q8NEP9 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
ZNF555Q8NEP9 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ZNF555Q8NEP9 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.08■□□□□ 0.97
ZNF555Q8NEP9 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.08■□□□□ 0.97
ZNF555Q8NEP9 DUX4L11-201ENST00000611504 1267 ntBASIC21.08■□□□□ 0.97
ZNF555Q8NEP9 DUX4L12-201ENST00000614593 1267 ntBASIC21.08■□□□□ 0.97
ZNF555Q8NEP9 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ZNF555Q8NEP9 DUX4L14-201ENST00000621227 1267 ntBASIC21.08■□□□□ 0.97
ZNF555Q8NEP9 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.08■□□□□ 0.96
ZNF555Q8NEP9 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ZNF555Q8NEP9 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ZNF555Q8NEP9 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF555Q8NEP9 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF555Q8NEP9 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF555Q8NEP9 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF555Q8NEP9 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
ZNF555Q8NEP9 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF555Q8NEP9 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF555Q8NEP9 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.07■□□□□ 0.96
ZNF555Q8NEP9 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF555Q8NEP9 MIR3960-201ENST00000583311 91 ntBASIC21.07■□□□□ 0.96
ZNF555Q8NEP9 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF555Q8NEP9 FOXO3B-201ENST00000395675 1928 ntBASIC21.07■□□□□ 0.96
ZNF555Q8NEP9 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.07■□□□□ 0.96
ZNF555Q8NEP9 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.07■□□□□ 0.96
ZNF555Q8NEP9 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
ZNF555Q8NEP9 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF555Q8NEP9 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF555Q8NEP9 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
ZNF555Q8NEP9 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF555Q8NEP9 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF555Q8NEP9 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF555Q8NEP9 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF555Q8NEP9 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
ZNF555Q8NEP9 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF555Q8NEP9 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF555Q8NEP9 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.05■□□□□ 0.96
ZNF555Q8NEP9 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF555Q8NEP9 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF555Q8NEP9 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF555Q8NEP9 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.05■□□□□ 0.96
ZNF555Q8NEP9 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.04■□□□□ 0.96
ZNF555Q8NEP9 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF555Q8NEP9 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF555Q8NEP9 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.04■□□□□ 0.96
ZNF555Q8NEP9 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.04■□□□□ 0.96
ZNF555Q8NEP9 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF555Q8NEP9 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF555Q8NEP9 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
ZNF555Q8NEP9 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF555Q8NEP9 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF555Q8NEP9 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.03■□□□□ 0.96
ZNF555Q8NEP9 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF555Q8NEP9 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.03■□□□□ 0.96
ZNF555Q8NEP9 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF555Q8NEP9 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF555Q8NEP9 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF555Q8NEP9 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.03■□□□□ 0.96
ZNF555Q8NEP9 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF555Q8NEP9 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF555Q8NEP9 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF555Q8NEP9 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF555Q8NEP9 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF555Q8NEP9 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF555Q8NEP9 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF555Q8NEP9 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC21.02■□□□□ 0.96
ZNF555Q8NEP9 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF555Q8NEP9 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF555Q8NEP9 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
ZNF555Q8NEP9 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
ZNF555Q8NEP9 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
ZNF555Q8NEP9 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF555Q8NEP9 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF555Q8NEP9 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF555Q8NEP9 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.01■□□□□ 0.95
ZNF555Q8NEP9 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.01■□□□□ 0.95
ZNF555Q8NEP9 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF555Q8NEP9 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF555Q8NEP9 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
ZNF555Q8NEP9 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF555Q8NEP9 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
ZNF555Q8NEP9 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21■□□□□ 0.95
ZNF555Q8NEP9 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF555Q8NEP9 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF555Q8NEP9 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF555Q8NEP9 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21■□□□□ 0.95
ZNF555Q8NEP9 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21■□□□□ 0.95
ZNF555Q8NEP9 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21■□□□□ 0.95
ZNF555Q8NEP9 AC025884.2-201ENST00000553429 711 ntBASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms