Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PHC3Q8NDX5 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PHC3Q8NDX5 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PHC3Q8NDX5 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PHC3Q8NDX5 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PHC3Q8NDX5 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
PHC3Q8NDX5 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PHC3Q8NDX5 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PHC3Q8NDX5 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
PHC3Q8NDX5 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
PHC3Q8NDX5 HES6-204ENST00000409182 863 ntTSL 2 BASIC22.64■■□□□ 1.21
PHC3Q8NDX5 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC22.64■■□□□ 1.21
PHC3Q8NDX5 KRT125P-201ENST00000546827 989 ntBASIC22.64■■□□□ 1.21
PHC3Q8NDX5 Z92544.1-202ENST00000571933 1220 ntBASIC22.64■■□□□ 1.21
PHC3Q8NDX5 TRIR-205ENST00000592273 783 ntTSL 3 BASIC22.64■■□□□ 1.21
PHC3Q8NDX5 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.64■■□□□ 1.21
PHC3Q8NDX5 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PHC3Q8NDX5 HLA-L-211ENST00000482052 1765 ntBASIC22.63■■□□□ 1.21
PHC3Q8NDX5 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC22.63■■□□□ 1.21
PHC3Q8NDX5 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PHC3Q8NDX5 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PHC3Q8NDX5 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22.63■■□□□ 1.21
PHC3Q8NDX5 MIR4787-201ENST00000607364 84 ntBASIC22.63■■□□□ 1.21
PHC3Q8NDX5 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PHC3Q8NDX5 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PHC3Q8NDX5 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PHC3Q8NDX5 AC021242.3-201ENST00000607598 1377 ntBASIC22.63■■□□□ 1.21
PHC3Q8NDX5 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC22.62■■□□□ 1.21
PHC3Q8NDX5 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PHC3Q8NDX5 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC22.62■■□□□ 1.21
PHC3Q8NDX5 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC22.62■■□□□ 1.21
PHC3Q8NDX5 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PHC3Q8NDX5 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PHC3Q8NDX5 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PHC3Q8NDX5 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PHC3Q8NDX5 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PHC3Q8NDX5 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PHC3Q8NDX5 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
PHC3Q8NDX5 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PHC3Q8NDX5 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
PHC3Q8NDX5 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
PHC3Q8NDX5 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.6■■□□□ 1.21
PHC3Q8NDX5 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PHC3Q8NDX5 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PHC3Q8NDX5 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
PHC3Q8NDX5 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.6■■□□□ 1.21
PHC3Q8NDX5 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PHC3Q8NDX5 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.6■■□□□ 1.21
PHC3Q8NDX5 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
PHC3Q8NDX5 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
PHC3Q8NDX5 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PHC3Q8NDX5 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PHC3Q8NDX5 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PHC3Q8NDX5 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PHC3Q8NDX5 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PHC3Q8NDX5 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
PHC3Q8NDX5 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC22.59■■□□□ 1.21
PHC3Q8NDX5 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PHC3Q8NDX5 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.59■■□□□ 1.21
PHC3Q8NDX5 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
PHC3Q8NDX5 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC22.59■■□□□ 1.21
PHC3Q8NDX5 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PHC3Q8NDX5 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PHC3Q8NDX5 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC22.58■■□□□ 1.21
PHC3Q8NDX5 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.58■■□□□ 1.21
PHC3Q8NDX5 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22.58■■□□□ 1.21
PHC3Q8NDX5 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.21
PHC3Q8NDX5 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
PHC3Q8NDX5 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
PHC3Q8NDX5 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.58■■□□□ 1.2
PHC3Q8NDX5 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
PHC3Q8NDX5 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC22.58■■□□□ 1.2
PHC3Q8NDX5 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
PHC3Q8NDX5 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
PHC3Q8NDX5 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PHC3Q8NDX5 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
PHC3Q8NDX5 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC22.57■■□□□ 1.2
PHC3Q8NDX5 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC22.57■■□□□ 1.2
PHC3Q8NDX5 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PHC3Q8NDX5 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PHC3Q8NDX5 TK2-202ENST00000417693 1046 ntTSL 2 BASIC22.57■■□□□ 1.2
PHC3Q8NDX5 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.57■■□□□ 1.2
PHC3Q8NDX5 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.57■■□□□ 1.2
PHC3Q8NDX5 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC22.57■■□□□ 1.2
PHC3Q8NDX5 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.57■■□□□ 1.2
PHC3Q8NDX5 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PHC3Q8NDX5 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PHC3Q8NDX5 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PHC3Q8NDX5 GUSBP5-201ENST00000418136 578 ntBASIC22.56■■□□□ 1.2
PHC3Q8NDX5 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC22.56■■□□□ 1.2
PHC3Q8NDX5 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
PHC3Q8NDX5 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC22.56■■□□□ 1.2
PHC3Q8NDX5 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PHC3Q8NDX5 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PHC3Q8NDX5 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
PHC3Q8NDX5 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PHC3Q8NDX5 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PHC3Q8NDX5 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC22.55■■□□□ 1.2
PHC3Q8NDX5 EED-207ENST00000528180 1745 ntTSL 5 BASIC22.55■■□□□ 1.2
PHC3Q8NDX5 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms