Protein–RNA interactions for Protein: Q8ND25

ZNRF1, E3 ubiquitin-protein ligase ZNRF1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF1Q8ND25 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
ZNRF1Q8ND25 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ZNRF1Q8ND25 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
ZNRF1Q8ND25 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ZNRF1Q8ND25 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.04■□□□□ 0.64
ZNRF1Q8ND25 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.04■□□□□ 0.64
ZNRF1Q8ND25 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ZNRF1Q8ND25 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
ZNRF1Q8ND25 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
ZNRF1Q8ND25 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.04■□□□□ 0.64
ZNRF1Q8ND25 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ZNRF1Q8ND25 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.04■□□□□ 0.64
ZNRF1Q8ND25 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.04■□□□□ 0.64
ZNRF1Q8ND25 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ZNRF1Q8ND25 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZNRF1Q8ND25 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZNRF1Q8ND25 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZNRF1Q8ND25 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.03■□□□□ 0.64
ZNRF1Q8ND25 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZNRF1Q8ND25 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ZNRF1Q8ND25 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZNRF1Q8ND25 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
ZNRF1Q8ND25 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZNRF1Q8ND25 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ZNRF1Q8ND25 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.03■□□□□ 0.64
ZNRF1Q8ND25 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZNRF1Q8ND25 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
ZNRF1Q8ND25 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZNRF1Q8ND25 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
ZNRF1Q8ND25 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ZNRF1Q8ND25 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
ZNRF1Q8ND25 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.02■□□□□ 0.64
ZNRF1Q8ND25 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ZNRF1Q8ND25 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ZNRF1Q8ND25 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ZNRF1Q8ND25 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.02■□□□□ 0.63
ZNRF1Q8ND25 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.02■□□□□ 0.63
ZNRF1Q8ND25 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZNRF1Q8ND25 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZNRF1Q8ND25 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.01■□□□□ 0.63
ZNRF1Q8ND25 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZNRF1Q8ND25 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZNRF1Q8ND25 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.01■□□□□ 0.63
ZNRF1Q8ND25 MTDHP2-201ENST00000601468 714 ntBASIC19.01■□□□□ 0.63
ZNRF1Q8ND25 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.01■□□□□ 0.63
ZNRF1Q8ND25 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ZNRF1Q8ND25 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.01■□□□□ 0.63
ZNRF1Q8ND25 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
ZNRF1Q8ND25 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZNRF1Q8ND25 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.01■□□□□ 0.63
ZNRF1Q8ND25 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19■□□□□ 0.63
ZNRF1Q8ND25 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZNRF1Q8ND25 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZNRF1Q8ND25 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZNRF1Q8ND25 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZNRF1Q8ND25 GUSBP5-201ENST00000418136 578 ntBASIC19■□□□□ 0.63
ZNRF1Q8ND25 MIR6722-201ENST00000617286 78 ntBASIC19■□□□□ 0.63
ZNRF1Q8ND25 REST-206ENST00000612429 1376 ntTSL 5 BASIC19■□□□□ 0.63
ZNRF1Q8ND25 REST-207ENST00000616975 1370 ntTSL 5 BASIC19■□□□□ 0.63
ZNRF1Q8ND25 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19■□□□□ 0.63
ZNRF1Q8ND25 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZNRF1Q8ND25 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19■□□□□ 0.63
ZNRF1Q8ND25 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
ZNRF1Q8ND25 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
ZNRF1Q8ND25 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19■□□□□ 0.63
ZNRF1Q8ND25 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
ZNRF1Q8ND25 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
ZNRF1Q8ND25 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNRF1Q8ND25 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
ZNRF1Q8ND25 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ZNRF1Q8ND25 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNRF1Q8ND25 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNRF1Q8ND25 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC18.99■□□□□ 0.63
ZNRF1Q8ND25 UNC93B8-201ENST00000511903 705 ntBASIC18.99■□□□□ 0.63
ZNRF1Q8ND25 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.99■□□□□ 0.63
ZNRF1Q8ND25 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.99■□□□□ 0.63
ZNRF1Q8ND25 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNRF1Q8ND25 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
ZNRF1Q8ND25 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.99■□□□□ 0.63
ZNRF1Q8ND25 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ZNRF1Q8ND25 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZNRF1Q8ND25 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
ZNRF1Q8ND25 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.98■□□□□ 0.63
ZNRF1Q8ND25 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ZNRF1Q8ND25 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZNRF1Q8ND25 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
ZNRF1Q8ND25 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZNRF1Q8ND25 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ZNRF1Q8ND25 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.98■□□□□ 0.63
ZNRF1Q8ND25 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.98■□□□□ 0.63
ZNRF1Q8ND25 AC010997.5-201ENST00000609182 354 ntBASIC18.98■□□□□ 0.63
ZNRF1Q8ND25 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZNRF1Q8ND25 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZNRF1Q8ND25 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
ZNRF1Q8ND25 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZNRF1Q8ND25 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZNRF1Q8ND25 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
ZNRF1Q8ND25 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.97■□□□□ 0.63
ZNRF1Q8ND25 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.97■□□□□ 0.63
ZNRF1Q8ND25 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms