Protein–RNA interactions for Protein: Q8NA58

PNLDC1, Poly(A)-specific ribonuclease PNLDC1, humanhuman

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNLDC1Q8NA58 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PNLDC1Q8NA58 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.78■□□□□ 0.76
PNLDC1Q8NA58 AC010980.1-201ENST00000587192 1142 ntBASIC19.78■□□□□ 0.76
PNLDC1Q8NA58 AC090877.2-201ENST00000558441 1738 ntBASIC19.78■□□□□ 0.76
PNLDC1Q8NA58 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PNLDC1Q8NA58 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PNLDC1Q8NA58 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PNLDC1Q8NA58 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PNLDC1Q8NA58 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PNLDC1Q8NA58 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
PNLDC1Q8NA58 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
PNLDC1Q8NA58 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
PNLDC1Q8NA58 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.77■□□□□ 0.76
PNLDC1Q8NA58 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PNLDC1Q8NA58 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
PNLDC1Q8NA58 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PNLDC1Q8NA58 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
PNLDC1Q8NA58 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PNLDC1Q8NA58 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.77■□□□□ 0.76
PNLDC1Q8NA58 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.77■□□□□ 0.76
PNLDC1Q8NA58 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.75
PNLDC1Q8NA58 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
PNLDC1Q8NA58 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.76■□□□□ 0.75
PNLDC1Q8NA58 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.76■□□□□ 0.75
PNLDC1Q8NA58 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.76■□□□□ 0.75
PNLDC1Q8NA58 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PNLDC1Q8NA58 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PNLDC1Q8NA58 AL592295.1-201ENST00000400984 884 ntBASIC19.76■□□□□ 0.75
PNLDC1Q8NA58 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.76■□□□□ 0.75
PNLDC1Q8NA58 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.76■□□□□ 0.75
PNLDC1Q8NA58 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PNLDC1Q8NA58 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PNLDC1Q8NA58 AL161729.1-201ENST00000604104 1402 ntBASIC19.76■□□□□ 0.75
PNLDC1Q8NA58 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PNLDC1Q8NA58 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PNLDC1Q8NA58 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PNLDC1Q8NA58 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.75■□□□□ 0.75
PNLDC1Q8NA58 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
PNLDC1Q8NA58 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PNLDC1Q8NA58 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
PNLDC1Q8NA58 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
PNLDC1Q8NA58 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
PNLDC1Q8NA58 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PNLDC1Q8NA58 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.75■□□□□ 0.75
PNLDC1Q8NA58 AC019171.1-201ENST00000601251 1056 ntBASIC19.75■□□□□ 0.75
PNLDC1Q8NA58 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.75■□□□□ 0.75
PNLDC1Q8NA58 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.75■□□□□ 0.75
PNLDC1Q8NA58 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PNLDC1Q8NA58 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
PNLDC1Q8NA58 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.75■□□□□ 0.75
PNLDC1Q8NA58 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PNLDC1Q8NA58 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
PNLDC1Q8NA58 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PNLDC1Q8NA58 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PNLDC1Q8NA58 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PNLDC1Q8NA58 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.74■□□□□ 0.75
PNLDC1Q8NA58 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
PNLDC1Q8NA58 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PNLDC1Q8NA58 YBX1P4-201ENST00000392794 808 ntBASIC19.74■□□□□ 0.75
PNLDC1Q8NA58 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.74■□□□□ 0.75
PNLDC1Q8NA58 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PNLDC1Q8NA58 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PNLDC1Q8NA58 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.74■□□□□ 0.75
PNLDC1Q8NA58 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PNLDC1Q8NA58 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PNLDC1Q8NA58 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PNLDC1Q8NA58 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.73■□□□□ 0.75
PNLDC1Q8NA58 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PNLDC1Q8NA58 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PNLDC1Q8NA58 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PNLDC1Q8NA58 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
PNLDC1Q8NA58 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PNLDC1Q8NA58 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PNLDC1Q8NA58 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PNLDC1Q8NA58 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.73■□□□□ 0.75
PNLDC1Q8NA58 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PNLDC1Q8NA58 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
PNLDC1Q8NA58 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
PNLDC1Q8NA58 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PNLDC1Q8NA58 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.73■□□□□ 0.75
PNLDC1Q8NA58 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PNLDC1Q8NA58 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PNLDC1Q8NA58 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.72■□□□□ 0.75
PNLDC1Q8NA58 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PNLDC1Q8NA58 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.72■□□□□ 0.75
PNLDC1Q8NA58 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PNLDC1Q8NA58 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PNLDC1Q8NA58 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PNLDC1Q8NA58 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PNLDC1Q8NA58 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
PNLDC1Q8NA58 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PNLDC1Q8NA58 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
PNLDC1Q8NA58 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.71■□□□□ 0.75
PNLDC1Q8NA58 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PNLDC1Q8NA58 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PNLDC1Q8NA58 RARRES2P1-201ENST00000474487 481 ntBASIC19.71■□□□□ 0.75
PNLDC1Q8NA58 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.71■□□□□ 0.75
PNLDC1Q8NA58 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PNLDC1Q8NA58 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.7■□□□□ 0.74
PNLDC1Q8NA58 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms