Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 AC138932.3-201ENST00000567634 1902 ntBASIC20.25■□□□□ 0.83
CNEP1R1Q8N9A8 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNEP1R1Q8N9A8 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNEP1R1Q8N9A8 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.25■□□□□ 0.83
CNEP1R1Q8N9A8 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.25■□□□□ 0.83
CNEP1R1Q8N9A8 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CNEP1R1Q8N9A8 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.24■□□□□ 0.83
CNEP1R1Q8N9A8 MIR638-201ENST00000385237 100 ntBASIC20.24■□□□□ 0.83
CNEP1R1Q8N9A8 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.24■□□□□ 0.83
CNEP1R1Q8N9A8 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
CNEP1R1Q8N9A8 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
CNEP1R1Q8N9A8 AL161729.1-201ENST00000604104 1402 ntBASIC20.24■□□□□ 0.83
CNEP1R1Q8N9A8 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.24■□□□□ 0.83
CNEP1R1Q8N9A8 AC020928.2-201ENST00000588717 2197 ntBASIC20.24■□□□□ 0.83
CNEP1R1Q8N9A8 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNEP1R1Q8N9A8 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNEP1R1Q8N9A8 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CNEP1R1Q8N9A8 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CNEP1R1Q8N9A8 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CNEP1R1Q8N9A8 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CNEP1R1Q8N9A8 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CNEP1R1Q8N9A8 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNEP1R1Q8N9A8 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.22■□□□□ 0.83
CNEP1R1Q8N9A8 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNEP1R1Q8N9A8 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.22■□□□□ 0.83
CNEP1R1Q8N9A8 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNEP1R1Q8N9A8 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.21■□□□□ 0.83
CNEP1R1Q8N9A8 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.21■□□□□ 0.83
CNEP1R1Q8N9A8 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CNEP1R1Q8N9A8 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CNEP1R1Q8N9A8 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CNEP1R1Q8N9A8 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.21■□□□□ 0.83
CNEP1R1Q8N9A8 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CNEP1R1Q8N9A8 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CNEP1R1Q8N9A8 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CNEP1R1Q8N9A8 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNEP1R1Q8N9A8 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.21■□□□□ 0.83
CNEP1R1Q8N9A8 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNEP1R1Q8N9A8 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CNEP1R1Q8N9A8 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CNEP1R1Q8N9A8 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNEP1R1Q8N9A8 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNEP1R1Q8N9A8 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNEP1R1Q8N9A8 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNEP1R1Q8N9A8 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.2■□□□□ 0.82
CNEP1R1Q8N9A8 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNEP1R1Q8N9A8 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.2■□□□□ 0.82
CNEP1R1Q8N9A8 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNEP1R1Q8N9A8 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNEP1R1Q8N9A8 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.2■□□□□ 0.82
CNEP1R1Q8N9A8 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNEP1R1Q8N9A8 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNEP1R1Q8N9A8 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.19■□□□□ 0.82
CNEP1R1Q8N9A8 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CNEP1R1Q8N9A8 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.19■□□□□ 0.82
CNEP1R1Q8N9A8 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CNEP1R1Q8N9A8 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CNEP1R1Q8N9A8 UNC93B3-201ENST00000308076 687 ntBASIC20.19■□□□□ 0.82
CNEP1R1Q8N9A8 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.19■□□□□ 0.82
CNEP1R1Q8N9A8 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNEP1R1Q8N9A8 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.19■□□□□ 0.82
CNEP1R1Q8N9A8 PBX2P1-201ENST00000493219 1291 ntBASIC20.19■□□□□ 0.82
CNEP1R1Q8N9A8 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.19■□□□□ 0.82
CNEP1R1Q8N9A8 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNEP1R1Q8N9A8 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CNEP1R1Q8N9A8 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CNEP1R1Q8N9A8 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNEP1R1Q8N9A8 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNEP1R1Q8N9A8 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNEP1R1Q8N9A8 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CNEP1R1Q8N9A8 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.18■□□□□ 0.82
CNEP1R1Q8N9A8 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.18■□□□□ 0.82
CNEP1R1Q8N9A8 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.18■□□□□ 0.82
CNEP1R1Q8N9A8 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNEP1R1Q8N9A8 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
CNEP1R1Q8N9A8 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNEP1R1Q8N9A8 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CNEP1R1Q8N9A8 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNEP1R1Q8N9A8 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CNEP1R1Q8N9A8 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CNEP1R1Q8N9A8 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNEP1R1Q8N9A8 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNEP1R1Q8N9A8 AC009102.2-201ENST00000606772 1639 ntBASIC20.16■□□□□ 0.82
CNEP1R1Q8N9A8 ALDH1A3-203ENST00000557963 1670 ntBASIC20.16■□□□□ 0.82
CNEP1R1Q8N9A8 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CNEP1R1Q8N9A8 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CNEP1R1Q8N9A8 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CNEP1R1Q8N9A8 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CNEP1R1Q8N9A8 AL136162.1-201ENST00000607711 1078 ntBASIC20.16■□□□□ 0.82
CNEP1R1Q8N9A8 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.16■□□□□ 0.82
CNEP1R1Q8N9A8 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CNEP1R1Q8N9A8 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CNEP1R1Q8N9A8 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CNEP1R1Q8N9A8 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNEP1R1Q8N9A8 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.15■□□□□ 0.82
CNEP1R1Q8N9A8 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.15■□□□□ 0.82
CNEP1R1Q8N9A8 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CNEP1R1Q8N9A8 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CNEP1R1Q8N9A8 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.15■□□□□ 0.82
CNEP1R1Q8N9A8 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms