Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.63■■□□□ 1.05
ARHGEF39Q8N4T4 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ARHGEF39Q8N4T4 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.63■■□□□ 1.05
ARHGEF39Q8N4T4 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.63■■□□□ 1.05
ARHGEF39Q8N4T4 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.63■■□□□ 1.05
ARHGEF39Q8N4T4 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ARHGEF39Q8N4T4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ARHGEF39Q8N4T4 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.63■■□□□ 1.05
ARHGEF39Q8N4T4 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ARHGEF39Q8N4T4 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
ARHGEF39Q8N4T4 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
ARHGEF39Q8N4T4 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ARHGEF39Q8N4T4 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ARHGEF39Q8N4T4 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
ARHGEF39Q8N4T4 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
ARHGEF39Q8N4T4 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.62■■□□□ 1.05
ARHGEF39Q8N4T4 MIR4466-201ENST00000606121 54 ntBASIC21.62■■□□□ 1.05
ARHGEF39Q8N4T4 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ARHGEF39Q8N4T4 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.62■■□□□ 1.05
ARHGEF39Q8N4T4 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ARHGEF39Q8N4T4 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ARHGEF39Q8N4T4 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
ARHGEF39Q8N4T4 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.61■■□□□ 1.05
ARHGEF39Q8N4T4 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
ARHGEF39Q8N4T4 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
ARHGEF39Q8N4T4 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ARHGEF39Q8N4T4 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ARHGEF39Q8N4T4 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
ARHGEF39Q8N4T4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ARHGEF39Q8N4T4 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ARHGEF39Q8N4T4 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ARHGEF39Q8N4T4 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ARHGEF39Q8N4T4 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.61■■□□□ 1.05
ARHGEF39Q8N4T4 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
ARHGEF39Q8N4T4 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ARHGEF39Q8N4T4 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ARHGEF39Q8N4T4 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ARHGEF39Q8N4T4 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
ARHGEF39Q8N4T4 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.6■■□□□ 1.05
ARHGEF39Q8N4T4 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ARHGEF39Q8N4T4 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ARHGEF39Q8N4T4 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.6■■□□□ 1.05
ARHGEF39Q8N4T4 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
ARHGEF39Q8N4T4 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ARHGEF39Q8N4T4 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
ARHGEF39Q8N4T4 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.59■■□□□ 1.05
ARHGEF39Q8N4T4 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
ARHGEF39Q8N4T4 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.59■■□□□ 1.05
ARHGEF39Q8N4T4 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.59■■□□□ 1.05
ARHGEF39Q8N4T4 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ARHGEF39Q8N4T4 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.58■■□□□ 1.05
ARHGEF39Q8N4T4 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ARHGEF39Q8N4T4 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
ARHGEF39Q8N4T4 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
ARHGEF39Q8N4T4 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ARHGEF39Q8N4T4 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ARHGEF39Q8N4T4 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
ARHGEF39Q8N4T4 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ARHGEF39Q8N4T4 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
ARHGEF39Q8N4T4 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.58■■□□□ 1.05
ARHGEF39Q8N4T4 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.58■■□□□ 1.04
ARHGEF39Q8N4T4 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ARHGEF39Q8N4T4 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.57■■□□□ 1.04
ARHGEF39Q8N4T4 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ARHGEF39Q8N4T4 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ARHGEF39Q8N4T4 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
ARHGEF39Q8N4T4 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ARHGEF39Q8N4T4 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ARHGEF39Q8N4T4 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.56■■□□□ 1.04
ARHGEF39Q8N4T4 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ARHGEF39Q8N4T4 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ARHGEF39Q8N4T4 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ARHGEF39Q8N4T4 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ARHGEF39Q8N4T4 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ARHGEF39Q8N4T4 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ARHGEF39Q8N4T4 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ARHGEF39Q8N4T4 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.55■■□□□ 1.04
ARHGEF39Q8N4T4 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ARHGEF39Q8N4T4 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
ARHGEF39Q8N4T4 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
ARHGEF39Q8N4T4 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ARHGEF39Q8N4T4 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.55■■□□□ 1.04
ARHGEF39Q8N4T4 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ARHGEF39Q8N4T4 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ARHGEF39Q8N4T4 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.55■■□□□ 1.04
ARHGEF39Q8N4T4 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ARHGEF39Q8N4T4 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ARHGEF39Q8N4T4 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
ARHGEF39Q8N4T4 AC009102.2-201ENST00000606772 1639 ntBASIC21.55■■□□□ 1.04
ARHGEF39Q8N4T4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.55■■□□□ 1.04
ARHGEF39Q8N4T4 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ARHGEF39Q8N4T4 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.54■■□□□ 1.04
ARHGEF39Q8N4T4 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.54■■□□□ 1.04
ARHGEF39Q8N4T4 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
ARHGEF39Q8N4T4 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ARHGEF39Q8N4T4 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ARHGEF39Q8N4T4 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ARHGEF39Q8N4T4 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ARHGEF39Q8N4T4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
ARHGEF39Q8N4T4 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms