Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PGBD3Q8N328 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.12■■□□□ 1.29
PGBD3Q8N328 AC026271.2-201ENST00000428091 497 ntBASIC23.12■■□□□ 1.29
PGBD3Q8N328 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PGBD3Q8N328 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PGBD3Q8N328 MIR4767-201ENST00000582827 78 ntBASIC23.12■■□□□ 1.29
PGBD3Q8N328 MIR5787-201ENST00000611784 55 ntBASIC23.12■■□□□ 1.29
PGBD3Q8N328 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.12■■□□□ 1.29
PGBD3Q8N328 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PGBD3Q8N328 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
PGBD3Q8N328 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.12■■□□□ 1.29
PGBD3Q8N328 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PGBD3Q8N328 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
PGBD3Q8N328 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PGBD3Q8N328 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PGBD3Q8N328 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.11■■□□□ 1.29
PGBD3Q8N328 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PGBD3Q8N328 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
PGBD3Q8N328 MIR939-201ENST00000401314 82 ntBASIC23.11■■□□□ 1.29
PGBD3Q8N328 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
PGBD3Q8N328 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.11■■□□□ 1.29
PGBD3Q8N328 AP001330.3-201ENST00000520123 633 ntBASIC23.11■■□□□ 1.29
PGBD3Q8N328 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
PGBD3Q8N328 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PGBD3Q8N328 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.1■■□□□ 1.29
PGBD3Q8N328 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PGBD3Q8N328 SLC6A10P-202ENST00000431994 2058 ntBASIC23.1■■□□□ 1.29
PGBD3Q8N328 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PGBD3Q8N328 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PGBD3Q8N328 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC23.1■■□□□ 1.29
PGBD3Q8N328 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
PGBD3Q8N328 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
PGBD3Q8N328 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.1■■□□□ 1.29
PGBD3Q8N328 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PGBD3Q8N328 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PGBD3Q8N328 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
PGBD3Q8N328 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PGBD3Q8N328 AL022069.1-201ENST00000568025 1636 ntBASIC23.09■■□□□ 1.29
PGBD3Q8N328 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PGBD3Q8N328 SERBP1P1-201ENST00000396021 1160 ntBASIC23.09■■□□□ 1.29
PGBD3Q8N328 AC091305.1-201ENST00000479476 895 ntBASIC23.09■■□□□ 1.29
PGBD3Q8N328 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PGBD3Q8N328 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC23.09■■□□□ 1.29
PGBD3Q8N328 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
PGBD3Q8N328 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
PGBD3Q8N328 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PGBD3Q8N328 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.08■■□□□ 1.29
PGBD3Q8N328 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.08■■□□□ 1.29
PGBD3Q8N328 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC23.08■■□□□ 1.29
PGBD3Q8N328 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.08■■□□□ 1.29
PGBD3Q8N328 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PGBD3Q8N328 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PGBD3Q8N328 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
PGBD3Q8N328 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.07■■□□□ 1.28
PGBD3Q8N328 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.07■■□□□ 1.28
PGBD3Q8N328 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PGBD3Q8N328 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PGBD3Q8N328 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PGBD3Q8N328 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PGBD3Q8N328 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PGBD3Q8N328 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PGBD3Q8N328 MAG-206ENST00000597035 542 ntTSL 4 BASIC23.06■■□□□ 1.28
PGBD3Q8N328 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PGBD3Q8N328 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PGBD3Q8N328 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.06■■□□□ 1.28
PGBD3Q8N328 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.06■■□□□ 1.28
PGBD3Q8N328 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PGBD3Q8N328 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PGBD3Q8N328 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.06■■□□□ 1.28
PGBD3Q8N328 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
PGBD3Q8N328 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PGBD3Q8N328 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
PGBD3Q8N328 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC23.05■■□□□ 1.28
PGBD3Q8N328 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.05■■□□□ 1.28
PGBD3Q8N328 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
PGBD3Q8N328 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PGBD3Q8N328 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PGBD3Q8N328 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.05■■□□□ 1.28
PGBD3Q8N328 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PGBD3Q8N328 AC104564.3-201ENST00000582367 638 ntBASIC23.05■■□□□ 1.28
PGBD3Q8N328 AC008764.7-201ENST00000593779 1081 ntBASIC23.05■■□□□ 1.28
PGBD3Q8N328 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PGBD3Q8N328 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
PGBD3Q8N328 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC23.05■■□□□ 1.28
PGBD3Q8N328 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PGBD3Q8N328 AC009102.2-201ENST00000606772 1639 ntBASIC23.04■■□□□ 1.28
PGBD3Q8N328 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PGBD3Q8N328 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC23.04■■□□□ 1.28
PGBD3Q8N328 CA15P2-201ENST00000611168 834 ntBASIC23.04■■□□□ 1.28
PGBD3Q8N328 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PGBD3Q8N328 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.04■■□□□ 1.28
PGBD3Q8N328 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.03■■□□□ 1.28
PGBD3Q8N328 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.03■■□□□ 1.28
PGBD3Q8N328 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.03■■□□□ 1.28
PGBD3Q8N328 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PGBD3Q8N328 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.03■■□□□ 1.28
PGBD3Q8N328 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.03■■□□□ 1.28
PGBD3Q8N328 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PGBD3Q8N328 RASA4CP-201ENST00000424092 1398 ntBASIC23.02■■□□□ 1.28
PGBD3Q8N328 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms