Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL27A1Q8IZC6 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
COL27A1Q8IZC6 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
COL27A1Q8IZC6 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.81■■□□□ 1.08
COL27A1Q8IZC6 AL022069.1-201ENST00000568025 1636 ntBASIC21.81■■□□□ 1.08
COL27A1Q8IZC6 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL27A1Q8IZC6 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
COL27A1Q8IZC6 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL27A1Q8IZC6 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
COL27A1Q8IZC6 BX842568.3-201ENST00000418104 571 ntBASIC21.81■■□□□ 1.08
COL27A1Q8IZC6 AC034268.1-201ENST00000441047 882 ntBASIC21.81■■□□□ 1.08
COL27A1Q8IZC6 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.81■■□□□ 1.08
COL27A1Q8IZC6 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL27A1Q8IZC6 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.81■■□□□ 1.08
COL27A1Q8IZC6 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL27A1Q8IZC6 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.8■■□□□ 1.08
COL27A1Q8IZC6 KRT18P5-201ENST00000436075 1291 ntBASIC21.8■■□□□ 1.08
COL27A1Q8IZC6 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.8■■□□□ 1.08
COL27A1Q8IZC6 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.8■■□□□ 1.08
COL27A1Q8IZC6 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COL27A1Q8IZC6 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.8■■□□□ 1.08
COL27A1Q8IZC6 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COL27A1Q8IZC6 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
COL27A1Q8IZC6 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
COL27A1Q8IZC6 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
COL27A1Q8IZC6 AC027612.3-201ENST00000413684 1047 ntBASIC21.79■■□□□ 1.08
COL27A1Q8IZC6 AC233992.3-201ENST00000607491 485 ntBASIC21.79■■□□□ 1.08
COL27A1Q8IZC6 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
COL27A1Q8IZC6 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL27A1Q8IZC6 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
COL27A1Q8IZC6 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL27A1Q8IZC6 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.78■■□□□ 1.08
COL27A1Q8IZC6 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.78■■□□□ 1.08
COL27A1Q8IZC6 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
COL27A1Q8IZC6 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
COL27A1Q8IZC6 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL27A1Q8IZC6 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.77■■□□□ 1.08
COL27A1Q8IZC6 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.77■■□□□ 1.08
COL27A1Q8IZC6 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.77■■□□□ 1.08
COL27A1Q8IZC6 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
COL27A1Q8IZC6 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.77■■□□□ 1.08
COL27A1Q8IZC6 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.77■■□□□ 1.08
COL27A1Q8IZC6 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL27A1Q8IZC6 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
COL27A1Q8IZC6 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL27A1Q8IZC6 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.77■■□□□ 1.08
COL27A1Q8IZC6 MIR3181-201ENST00000578512 73 ntBASIC21.77■■□□□ 1.08
COL27A1Q8IZC6 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
COL27A1Q8IZC6 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
COL27A1Q8IZC6 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.76■■□□□ 1.07
COL27A1Q8IZC6 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
COL27A1Q8IZC6 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.76■■□□□ 1.07
COL27A1Q8IZC6 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.76■■□□□ 1.07
COL27A1Q8IZC6 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.76■■□□□ 1.07
COL27A1Q8IZC6 AC009086.3-201ENST00000623486 1008 ntBASIC21.76■■□□□ 1.07
COL27A1Q8IZC6 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.76■■□□□ 1.07
COL27A1Q8IZC6 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL27A1Q8IZC6 AC090192.1-201ENST00000517740 490 ntBASIC21.75■■□□□ 1.07
COL27A1Q8IZC6 DUX4L2-201ENST00000561772 1275 ntBASIC21.75■■□□□ 1.07
COL27A1Q8IZC6 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.75■■□□□ 1.07
COL27A1Q8IZC6 DUX4L6-201ENST00000626483 1275 ntBASIC21.75■■□□□ 1.07
COL27A1Q8IZC6 DUX4L1-201ENST00000627662 1275 ntBASIC21.75■■□□□ 1.07
COL27A1Q8IZC6 DUX4L8-201ENST00000629013 1275 ntBASIC21.75■■□□□ 1.07
COL27A1Q8IZC6 DUX4L3-201ENST00000630187 1275 ntBASIC21.75■■□□□ 1.07
COL27A1Q8IZC6 DUX4L7-201ENST00000630678 1275 ntBASIC21.75■■□□□ 1.07
COL27A1Q8IZC6 DUX4L5-201ENST00000630834 1275 ntBASIC21.75■■□□□ 1.07
COL27A1Q8IZC6 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL27A1Q8IZC6 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
COL27A1Q8IZC6 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL27A1Q8IZC6 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL27A1Q8IZC6 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
COL27A1Q8IZC6 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
COL27A1Q8IZC6 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
COL27A1Q8IZC6 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.75■■□□□ 1.07
COL27A1Q8IZC6 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.74■■□□□ 1.07
COL27A1Q8IZC6 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL27A1Q8IZC6 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL27A1Q8IZC6 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL27A1Q8IZC6 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL27A1Q8IZC6 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.74■■□□□ 1.07
COL27A1Q8IZC6 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL27A1Q8IZC6 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL27A1Q8IZC6 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
COL27A1Q8IZC6 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.74■■□□□ 1.07
COL27A1Q8IZC6 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.74■■□□□ 1.07
COL27A1Q8IZC6 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.74■■□□□ 1.07
COL27A1Q8IZC6 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL27A1Q8IZC6 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.74■■□□□ 1.07
COL27A1Q8IZC6 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COL27A1Q8IZC6 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.73■■□□□ 1.07
COL27A1Q8IZC6 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.73■■□□□ 1.07
COL27A1Q8IZC6 AC092437.1-201ENST00000624794 1048 ntBASIC21.73■■□□□ 1.07
COL27A1Q8IZC6 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL27A1Q8IZC6 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.73■■□□□ 1.07
COL27A1Q8IZC6 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
COL27A1Q8IZC6 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
COL27A1Q8IZC6 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
COL27A1Q8IZC6 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COL27A1Q8IZC6 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COL27A1Q8IZC6 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms