Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC24.12■■□□□ 1.45
RNF135Q8IUD6 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
RNF135Q8IUD6 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC24.11■■□□□ 1.45
RNF135Q8IUD6 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
RNF135Q8IUD6 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
RNF135Q8IUD6 LBH-205ENST00000407930 756 ntTSL 2 BASIC24.11■■□□□ 1.45
RNF135Q8IUD6 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
RNF135Q8IUD6 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
RNF135Q8IUD6 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC24.11■■□□□ 1.45
RNF135Q8IUD6 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC24.11■■□□□ 1.45
RNF135Q8IUD6 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC24.11■■□□□ 1.45
RNF135Q8IUD6 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC24.11■■□□□ 1.45
RNF135Q8IUD6 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
RNF135Q8IUD6 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RNF135Q8IUD6 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
RNF135Q8IUD6 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
RNF135Q8IUD6 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RNF135Q8IUD6 FOXO3B-201ENST00000395675 1928 ntBASIC24.1■■□□□ 1.45
RNF135Q8IUD6 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC24.1■■□□□ 1.45
RNF135Q8IUD6 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC24.1■■□□□ 1.45
RNF135Q8IUD6 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC24.1■■□□□ 1.45
RNF135Q8IUD6 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
RNF135Q8IUD6 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RNF135Q8IUD6 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC24.09■■□□□ 1.45
RNF135Q8IUD6 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RNF135Q8IUD6 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RNF135Q8IUD6 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
RNF135Q8IUD6 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
RNF135Q8IUD6 DENND3-207ENST00000518347 850 ntTSL 2 BASIC24.09■■□□□ 1.45
RNF135Q8IUD6 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC24.09■■□□□ 1.45
RNF135Q8IUD6 AC092437.1-201ENST00000624794 1048 ntBASIC24.09■■□□□ 1.45
RNF135Q8IUD6 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RNF135Q8IUD6 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RNF135Q8IUD6 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC24.09■■□□□ 1.45
RNF135Q8IUD6 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
RNF135Q8IUD6 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
RNF135Q8IUD6 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
RNF135Q8IUD6 KRT18P5-201ENST00000436075 1291 ntBASIC24.08■■□□□ 1.45
RNF135Q8IUD6 SLC47A1P1-202ENST00000449666 945 ntBASIC24.08■■□□□ 1.45
RNF135Q8IUD6 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC24.08■■□□□ 1.45
RNF135Q8IUD6 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
RNF135Q8IUD6 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC24.08■■□□□ 1.45
RNF135Q8IUD6 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RNF135Q8IUD6 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
RNF135Q8IUD6 AK1-201ENST00000223836 736 ntTSL 3 BASIC24.07■■□□□ 1.44
RNF135Q8IUD6 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC24.07■■□□□ 1.44
RNF135Q8IUD6 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC24.07■■□□□ 1.44
RNF135Q8IUD6 PTCHD3P2-201ENST00000424937 1205 ntBASIC24.07■■□□□ 1.44
RNF135Q8IUD6 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC24.07■■□□□ 1.44
RNF135Q8IUD6 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
RNF135Q8IUD6 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RNF135Q8IUD6 AC090877.2-201ENST00000558441 1738 ntBASIC24.07■■□□□ 1.44
RNF135Q8IUD6 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC24.06■■□□□ 1.44
RNF135Q8IUD6 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC24.06■■□□□ 1.44
RNF135Q8IUD6 HACD1-201ENST00000326961 773 ntTSL 2 BASIC24.06■■□□□ 1.44
RNF135Q8IUD6 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RNF135Q8IUD6 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC24.06■■□□□ 1.44
RNF135Q8IUD6 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC24.06■■□□□ 1.44
RNF135Q8IUD6 AC011298.3-201ENST00000615796 283 ntBASIC24.06■■□□□ 1.44
RNF135Q8IUD6 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC24.06■■□□□ 1.44
RNF135Q8IUD6 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
RNF135Q8IUD6 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
RNF135Q8IUD6 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RNF135Q8IUD6 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RNF135Q8IUD6 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC24.05■■□□□ 1.44
RNF135Q8IUD6 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RNF135Q8IUD6 AC005703.6-201ENST00000623265 1329 ntBASIC24.05■■□□□ 1.44
RNF135Q8IUD6 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RNF135Q8IUD6 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RNF135Q8IUD6 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC24.04■■□□□ 1.44
RNF135Q8IUD6 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
RNF135Q8IUD6 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
RNF135Q8IUD6 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
RNF135Q8IUD6 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC24.03■■□□□ 1.44
RNF135Q8IUD6 CEBPA-AS1-201ENST00000592982 2198 ntBASIC24.03■■□□□ 1.44
RNF135Q8IUD6 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RNF135Q8IUD6 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RNF135Q8IUD6 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC24.03■■□□□ 1.44
RNF135Q8IUD6 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
RNF135Q8IUD6 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
RNF135Q8IUD6 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC24.03■■□□□ 1.44
RNF135Q8IUD6 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
RNF135Q8IUD6 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC24.03■■□□□ 1.44
RNF135Q8IUD6 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC24.03■■□□□ 1.44
RNF135Q8IUD6 AC099791.2-201ENST00000605725 427 ntBASIC24.03■■□□□ 1.44
RNF135Q8IUD6 AL138724.1-201ENST00000606771 1088 ntBASIC24.03■■□□□ 1.44
RNF135Q8IUD6 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC24.03■■□□□ 1.44
RNF135Q8IUD6 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC24.03■■□□□ 1.44
RNF135Q8IUD6 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
RNF135Q8IUD6 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
RNF135Q8IUD6 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RNF135Q8IUD6 AC004911.1-201ENST00000416316 871 ntBASIC24.02■■□□□ 1.44
RNF135Q8IUD6 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
RNF135Q8IUD6 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC24.02■■□□□ 1.44
RNF135Q8IUD6 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC24.02■■□□□ 1.44
RNF135Q8IUD6 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
RNF135Q8IUD6 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
RNF135Q8IUD6 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.43
RNF135Q8IUD6 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.43
RNF135Q8IUD6 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms