Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.93■□□□□ 0.94
ZNF550Q7Z398 GUSBP5-201ENST00000418136 578 ntBASIC20.93■□□□□ 0.94
ZNF550Q7Z398 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.93■□□□□ 0.94
ZNF550Q7Z398 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF550Q7Z398 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF550Q7Z398 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF550Q7Z398 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF550Q7Z398 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF550Q7Z398 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.92■□□□□ 0.94
ZNF550Q7Z398 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF550Q7Z398 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF550Q7Z398 ALDH1A3-203ENST00000557963 1670 ntBASIC20.92■□□□□ 0.94
ZNF550Q7Z398 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZNF550Q7Z398 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZNF550Q7Z398 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ZNF550Q7Z398 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
ZNF550Q7Z398 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
ZNF550Q7Z398 AC239859.2-201ENST00000444165 318 ntBASIC20.91■□□□□ 0.94
ZNF550Q7Z398 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
ZNF550Q7Z398 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
ZNF550Q7Z398 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
ZNF550Q7Z398 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZNF550Q7Z398 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZNF550Q7Z398 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
ZNF550Q7Z398 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ZNF550Q7Z398 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.9■□□□□ 0.94
ZNF550Q7Z398 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.9■□□□□ 0.94
ZNF550Q7Z398 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZNF550Q7Z398 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZNF550Q7Z398 DUSP8P5-201ENST00000422884 1815 ntBASIC20.9■□□□□ 0.94
ZNF550Q7Z398 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZNF550Q7Z398 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZNF550Q7Z398 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ZNF550Q7Z398 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
ZNF550Q7Z398 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ZNF550Q7Z398 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ZNF550Q7Z398 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.89■□□□□ 0.93
ZNF550Q7Z398 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.89■□□□□ 0.93
ZNF550Q7Z398 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ZNF550Q7Z398 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ZNF550Q7Z398 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ZNF550Q7Z398 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
ZNF550Q7Z398 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZNF550Q7Z398 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ZNF550Q7Z398 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZNF550Q7Z398 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZNF550Q7Z398 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.88■□□□□ 0.93
ZNF550Q7Z398 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.88■□□□□ 0.93
ZNF550Q7Z398 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.88■□□□□ 0.93
ZNF550Q7Z398 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ZNF550Q7Z398 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZNF550Q7Z398 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZNF550Q7Z398 AC004448.1-201ENST00000458332 883 ntBASIC20.87■□□□□ 0.93
ZNF550Q7Z398 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.87■□□□□ 0.93
ZNF550Q7Z398 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.87■□□□□ 0.93
ZNF550Q7Z398 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.87■□□□□ 0.93
ZNF550Q7Z398 AC131212.1-201ENST00000613771 668 ntBASIC20.87■□□□□ 0.93
ZNF550Q7Z398 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
ZNF550Q7Z398 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZNF550Q7Z398 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZNF550Q7Z398 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.87■□□□□ 0.93
ZNF550Q7Z398 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.87■□□□□ 0.93
ZNF550Q7Z398 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
ZNF550Q7Z398 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.87■□□□□ 0.93
ZNF550Q7Z398 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF550Q7Z398 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF550Q7Z398 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF550Q7Z398 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF550Q7Z398 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF550Q7Z398 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF550Q7Z398 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.86■□□□□ 0.93
ZNF550Q7Z398 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF550Q7Z398 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF550Q7Z398 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.86■□□□□ 0.93
ZNF550Q7Z398 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF550Q7Z398 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
ZNF550Q7Z398 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF550Q7Z398 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.85■□□□□ 0.93
ZNF550Q7Z398 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.85■□□□□ 0.93
ZNF550Q7Z398 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF550Q7Z398 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF550Q7Z398 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.85■□□□□ 0.93
ZNF550Q7Z398 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.85■□□□□ 0.93
ZNF550Q7Z398 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF550Q7Z398 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF550Q7Z398 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
ZNF550Q7Z398 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.84■□□□□ 0.93
ZNF550Q7Z398 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF550Q7Z398 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.84■□□□□ 0.93
ZNF550Q7Z398 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.84■□□□□ 0.93
ZNF550Q7Z398 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
ZNF550Q7Z398 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF550Q7Z398 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ZNF550Q7Z398 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.83■□□□□ 0.93
ZNF550Q7Z398 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.83■□□□□ 0.93
ZNF550Q7Z398 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ZNF550Q7Z398 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.83■□□□□ 0.93
ZNF550Q7Z398 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
ZNF550Q7Z398 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
ZNF550Q7Z398 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms