Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SCXQ7RTU7 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
SCXQ7RTU7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC14.89□□□□□ -0.03
SCXQ7RTU7 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC14.88□□□□□ -0.03
SCXQ7RTU7 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SCXQ7RTU7 DUSP8P4-201ENST00000399538 1761 ntBASIC14.88□□□□□ -0.03
SCXQ7RTU7 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC14.88□□□□□ -0.03
SCXQ7RTU7 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SCXQ7RTU7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC14.88□□□□□ -0.03
SCXQ7RTU7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC14.88□□□□□ -0.03
SCXQ7RTU7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC14.88□□□□□ -0.03
SCXQ7RTU7 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC14.88□□□□□ -0.03
SCXQ7RTU7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC14.88□□□□□ -0.03
SCXQ7RTU7 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC14.88□□□□□ -0.03
SCXQ7RTU7 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SCXQ7RTU7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC14.88□□□□□ -0.03
SCXQ7RTU7 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC14.88□□□□□ -0.03
SCXQ7RTU7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SCXQ7RTU7 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SCXQ7RTU7 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SCXQ7RTU7 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SCXQ7RTU7 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SCXQ7RTU7 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SCXQ7RTU7 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
SCXQ7RTU7 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SCXQ7RTU7 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SCXQ7RTU7 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
SCXQ7RTU7 AC131281.2-201ENST00000520478 145 ntBASIC14.87□□□□□ -0.03
SCXQ7RTU7 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC14.87□□□□□ -0.03
SCXQ7RTU7 MIR6724-1-201ENST00000616420 92 ntBASIC14.87□□□□□ -0.03
SCXQ7RTU7 MIR6724-2-201ENST00000616483 92 ntBASIC14.87□□□□□ -0.03
SCXQ7RTU7 MIR6724-4-201ENST00000617390 92 ntBASIC14.87□□□□□ -0.03
SCXQ7RTU7 MIR6724-3-201ENST00000622482 92 ntBASIC14.87□□□□□ -0.03
SCXQ7RTU7 AL117332.1-201ENST00000622628 974 ntBASIC14.87□□□□□ -0.03
SCXQ7RTU7 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SCXQ7RTU7 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SCXQ7RTU7 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SCXQ7RTU7 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SCXQ7RTU7 AC092803.2-201ENST00000564287 1899 ntBASIC14.86□□□□□ -0.03
SCXQ7RTU7 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
SCXQ7RTU7 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SCXQ7RTU7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC14.86□□□□□ -0.03
SCXQ7RTU7 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SCXQ7RTU7 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SCXQ7RTU7 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SCXQ7RTU7 AF131216.4-201ENST00000638924 1588 ntBASIC14.85□□□□□ -0.03
SCXQ7RTU7 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SCXQ7RTU7 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SCXQ7RTU7 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SCXQ7RTU7 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC14.85□□□□□ -0.03
SCXQ7RTU7 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SCXQ7RTU7 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SCXQ7RTU7 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC14.85□□□□□ -0.03
SCXQ7RTU7 LSM4-201ENST00000252816 986 ntTSL 2 BASIC14.85□□□□□ -0.03
SCXQ7RTU7 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SCXQ7RTU7 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SCXQ7RTU7 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SCXQ7RTU7 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC14.85□□□□□ -0.03
SCXQ7RTU7 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC14.85□□□□□ -0.03
SCXQ7RTU7 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC14.85□□□□□ -0.03
SCXQ7RTU7 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SCXQ7RTU7 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SCXQ7RTU7 AC096887.2-201ENST00000623443 1957 ntBASIC14.85□□□□□ -0.03
SCXQ7RTU7 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC14.85□□□□□ -0.03
SCXQ7RTU7 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SCXQ7RTU7 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
SCXQ7RTU7 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SCXQ7RTU7 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
SCXQ7RTU7 CASK-201ENST00000378154 2494 ntTSL 5 BASIC14.84□□□□□ -0.03
SCXQ7RTU7 AL136116.3-201ENST00000402907 1138 ntBASIC14.84□□□□□ -0.03
SCXQ7RTU7 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SCXQ7RTU7 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SCXQ7RTU7 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC14.84□□□□□ -0.03
SCXQ7RTU7 CLTA-210ENST00000540080 989 ntTSL 2 BASIC14.84□□□□□ -0.03
SCXQ7RTU7 EXOG-217ENST00000630638 197 ntTSL 5 BASIC14.84□□□□□ -0.03
SCXQ7RTU7 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SCXQ7RTU7 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SCXQ7RTU7 AC097639.1-201ENST00000565519 1891 ntBASIC14.84□□□□□ -0.03
SCXQ7RTU7 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SCXQ7RTU7 AC012676.1-201ENST00000574705 1949 ntBASIC14.84□□□□□ -0.03
SCXQ7RTU7 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SCXQ7RTU7 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.03
SCXQ7RTU7 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
SCXQ7RTU7 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC14.83□□□□□ -0.04
SCXQ7RTU7 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SCXQ7RTU7 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SCXQ7RTU7 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SCXQ7RTU7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC14.83□□□□□ -0.04
SCXQ7RTU7 MIR3621-201ENST00000580529 85 ntBASIC14.83□□□□□ -0.04
SCXQ7RTU7 AL356740.2-201ENST00000601559 647 ntBASIC14.83□□□□□ -0.04
SCXQ7RTU7 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
SCXQ7RTU7 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SCXQ7RTU7 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SCXQ7RTU7 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SCXQ7RTU7 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SCXQ7RTU7 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SCXQ7RTU7 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SCXQ7RTU7 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SCXQ7RTU7 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SCXQ7RTU7 CLDN5-201ENST00000403084 2357 ntBASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms