Protein–RNA interactions for Protein: Q7RTT3

SSX9, Protein SSX9, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9Q7RTT3 DUSP8P5-201ENST00000422884 1815 ntBASIC18.68■□□□□ 0.58
SSX9Q7RTT3 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC18.68■□□□□ 0.58
SSX9Q7RTT3 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SSX9Q7RTT3 MIR6765-201ENST00000614092 87 ntBASIC18.68■□□□□ 0.58
SSX9Q7RTT3 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SSX9Q7RTT3 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
SSX9Q7RTT3 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSX9Q7RTT3 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSX9Q7RTT3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSX9Q7RTT3 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
SSX9Q7RTT3 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSX9Q7RTT3 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC18.68■□□□□ 0.58
SSX9Q7RTT3 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSX9Q7RTT3 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSX9Q7RTT3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.67■□□□□ 0.58
SSX9Q7RTT3 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.67■□□□□ 0.58
SSX9Q7RTT3 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSX9Q7RTT3 DUX4L9-201ENST00000449051 1259 ntBASIC18.67■□□□□ 0.58
SSX9Q7RTT3 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SSX9Q7RTT3 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC18.67■□□□□ 0.58
SSX9Q7RTT3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSX9Q7RTT3 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC18.67■□□□□ 0.58
SSX9Q7RTT3 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.67■□□□□ 0.58
SSX9Q7RTT3 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
SSX9Q7RTT3 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.66■□□□□ 0.58
SSX9Q7RTT3 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSX9Q7RTT3 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
SSX9Q7RTT3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
SSX9Q7RTT3 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
SSX9Q7RTT3 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSX9Q7RTT3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SSX9Q7RTT3 RARRES2P2-201ENST00000394842 485 ntBASIC18.66■□□□□ 0.58
SSX9Q7RTT3 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSX9Q7RTT3 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SSX9Q7RTT3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
SSX9Q7RTT3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSX9Q7RTT3 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC18.65■□□□□ 0.58
SSX9Q7RTT3 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SSX9Q7RTT3 AC090877.2-201ENST00000558441 1738 ntBASIC18.65■□□□□ 0.58
SSX9Q7RTT3 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.65■□□□□ 0.58
SSX9Q7RTT3 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SSX9Q7RTT3 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SSX9Q7RTT3 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SSX9Q7RTT3 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.64■□□□□ 0.57
SSX9Q7RTT3 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSX9Q7RTT3 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSX9Q7RTT3 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC18.64■□□□□ 0.57
SSX9Q7RTT3 AC087393.1-201ENST00000582896 145 ntBASIC18.64■□□□□ 0.57
SSX9Q7RTT3 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC18.64■□□□□ 0.57
SSX9Q7RTT3 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
SSX9Q7RTT3 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SSX9Q7RTT3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.64■□□□□ 0.57
SSX9Q7RTT3 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSX9Q7RTT3 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSX9Q7RTT3 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSX9Q7RTT3 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
SSX9Q7RTT3 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
SSX9Q7RTT3 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSX9Q7RTT3 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.63■□□□□ 0.57
SSX9Q7RTT3 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SSX9Q7RTT3 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSX9Q7RTT3 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSX9Q7RTT3 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC18.63■□□□□ 0.57
SSX9Q7RTT3 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSX9Q7RTT3 AL592295.1-201ENST00000400984 884 ntBASIC18.63■□□□□ 0.57
SSX9Q7RTT3 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.63■□□□□ 0.57
SSX9Q7RTT3 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SSX9Q7RTT3 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC18.63■□□□□ 0.57
SSX9Q7RTT3 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.63■□□□□ 0.57
SSX9Q7RTT3 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSX9Q7RTT3 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SSX9Q7RTT3 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSX9Q7RTT3 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSX9Q7RTT3 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.63■□□□□ 0.57
SSX9Q7RTT3 C9orf163-202ENST00000624034 2573 ntBASIC18.63■□□□□ 0.57
SSX9Q7RTT3 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.63■□□□□ 0.57
SSX9Q7RTT3 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSX9Q7RTT3 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSX9Q7RTT3 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSX9Q7RTT3 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSX9Q7RTT3 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.62■□□□□ 0.57
SSX9Q7RTT3 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC18.62■□□□□ 0.57
SSX9Q7RTT3 HSD17B1P1-201ENST00000590052 955 ntBASIC18.62■□□□□ 0.57
SSX9Q7RTT3 U85056.1-201ENST00000616429 682 ntBASIC18.62■□□□□ 0.57
SSX9Q7RTT3 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
SSX9Q7RTT3 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSX9Q7RTT3 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSX9Q7RTT3 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SSX9Q7RTT3 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.61■□□□□ 0.57
SSX9Q7RTT3 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SSX9Q7RTT3 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSX9Q7RTT3 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSX9Q7RTT3 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSX9Q7RTT3 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSX9Q7RTT3 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSX9Q7RTT3 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SSX9Q7RTT3 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SSX9Q7RTT3 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSX9Q7RTT3 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SSX9Q7RTT3 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms