Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 AL022069.1-201ENST00000568025 1636 ntBASIC23.96■■□□□ 1.43
SYCE2Q6PIF2 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
SYCE2Q6PIF2 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
SYCE2Q6PIF2 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
SYCE2Q6PIF2 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC23.96■■□□□ 1.43
SYCE2Q6PIF2 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.95■■□□□ 1.43
SYCE2Q6PIF2 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
SYCE2Q6PIF2 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.95■■□□□ 1.42
SYCE2Q6PIF2 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
SYCE2Q6PIF2 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC23.95■■□□□ 1.42
SYCE2Q6PIF2 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
SYCE2Q6PIF2 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SYCE2Q6PIF2 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC23.95■■□□□ 1.42
SYCE2Q6PIF2 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC23.95■■□□□ 1.42
SYCE2Q6PIF2 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SYCE2Q6PIF2 DUX4L2-201ENST00000561772 1275 ntBASIC23.95■■□□□ 1.42
SYCE2Q6PIF2 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SYCE2Q6PIF2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC23.95■■□□□ 1.42
SYCE2Q6PIF2 DUX4L6-201ENST00000626483 1275 ntBASIC23.95■■□□□ 1.42
SYCE2Q6PIF2 DUX4L1-201ENST00000627662 1275 ntBASIC23.95■■□□□ 1.42
SYCE2Q6PIF2 DUX4L8-201ENST00000629013 1275 ntBASIC23.95■■□□□ 1.42
SYCE2Q6PIF2 DUX4L3-201ENST00000630187 1275 ntBASIC23.95■■□□□ 1.42
SYCE2Q6PIF2 DUX4L7-201ENST00000630678 1275 ntBASIC23.95■■□□□ 1.42
SYCE2Q6PIF2 DUX4L5-201ENST00000630834 1275 ntBASIC23.95■■□□□ 1.42
SYCE2Q6PIF2 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SYCE2Q6PIF2 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SYCE2Q6PIF2 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
SYCE2Q6PIF2 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC23.94■■□□□ 1.42
SYCE2Q6PIF2 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC23.94■■□□□ 1.42
SYCE2Q6PIF2 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.94■■□□□ 1.42
SYCE2Q6PIF2 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SYCE2Q6PIF2 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SYCE2Q6PIF2 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
SYCE2Q6PIF2 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.93■■□□□ 1.42
SYCE2Q6PIF2 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC23.93■■□□□ 1.42
SYCE2Q6PIF2 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
SYCE2Q6PIF2 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SYCE2Q6PIF2 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
SYCE2Q6PIF2 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC23.92■■□□□ 1.42
SYCE2Q6PIF2 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
SYCE2Q6PIF2 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.92■■□□□ 1.42
SYCE2Q6PIF2 SLC6A10P-202ENST00000431994 2058 ntBASIC23.92■■□□□ 1.42
SYCE2Q6PIF2 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SYCE2Q6PIF2 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC23.92■■□□□ 1.42
SYCE2Q6PIF2 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC23.92■■□□□ 1.42
SYCE2Q6PIF2 AC126544.1-201ENST00000580842 1059 ntBASIC23.92■■□□□ 1.42
SYCE2Q6PIF2 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.92■■□□□ 1.42
SYCE2Q6PIF2 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
SYCE2Q6PIF2 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.92■■□□□ 1.42
SYCE2Q6PIF2 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.92■■□□□ 1.42
SYCE2Q6PIF2 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
SYCE2Q6PIF2 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
SYCE2Q6PIF2 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SYCE2Q6PIF2 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
SYCE2Q6PIF2 SLC47A1P1-202ENST00000449666 945 ntBASIC23.91■■□□□ 1.42
SYCE2Q6PIF2 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
SYCE2Q6PIF2 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.91■■□□□ 1.42
SYCE2Q6PIF2 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.91■■□□□ 1.42
SYCE2Q6PIF2 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SYCE2Q6PIF2 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
SYCE2Q6PIF2 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.9■■□□□ 1.42
SYCE2Q6PIF2 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SYCE2Q6PIF2 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
SYCE2Q6PIF2 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SYCE2Q6PIF2 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC23.9■■□□□ 1.42
SYCE2Q6PIF2 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC23.9■■□□□ 1.42
SYCE2Q6PIF2 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SYCE2Q6PIF2 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC23.9■■□□□ 1.42
SYCE2Q6PIF2 RAB43-208ENST00000615093 783 ntTSL 5 BASIC23.9■■□□□ 1.42
SYCE2Q6PIF2 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.9■■□□□ 1.42
SYCE2Q6PIF2 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
SYCE2Q6PIF2 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SYCE2Q6PIF2 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
SYCE2Q6PIF2 TSPY26P-201ENST00000476365 1326 ntBASIC23.89■■□□□ 1.42
SYCE2Q6PIF2 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
SYCE2Q6PIF2 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
SYCE2Q6PIF2 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SYCE2Q6PIF2 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
SYCE2Q6PIF2 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SYCE2Q6PIF2 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
SYCE2Q6PIF2 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC23.89■■□□□ 1.41
SYCE2Q6PIF2 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.89■■□□□ 1.41
SYCE2Q6PIF2 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.89■■□□□ 1.41
SYCE2Q6PIF2 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.88■■□□□ 1.41
SYCE2Q6PIF2 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
SYCE2Q6PIF2 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
SYCE2Q6PIF2 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC23.88■■□□□ 1.41
SYCE2Q6PIF2 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC23.88■■□□□ 1.41
SYCE2Q6PIF2 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SYCE2Q6PIF2 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SYCE2Q6PIF2 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
SYCE2Q6PIF2 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SYCE2Q6PIF2 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
SYCE2Q6PIF2 NME4-202ENST00000382940 766 ntTSL 3 BASIC23.88■■□□□ 1.41
SYCE2Q6PIF2 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC23.88■■□□□ 1.41
SYCE2Q6PIF2 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC23.88■■□□□ 1.41
SYCE2Q6PIF2 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC23.88■■□□□ 1.41
SYCE2Q6PIF2 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.88■■□□□ 1.41
SYCE2Q6PIF2 pRNA.6-201ENST00000610482 90 ntBASIC23.88■■□□□ 1.41
SYCE2Q6PIF2 pRNA.5-201ENST00000612139 90 ntBASIC23.88■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms