Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM88Q6PEY1 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC18.28■□□□□ 0.52
TMEM88Q6PEY1 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC18.28■□□□□ 0.52
TMEM88Q6PEY1 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM88Q6PEY1 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TMEM88Q6PEY1 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC18.27■□□□□ 0.52
TMEM88Q6PEY1 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
TMEM88Q6PEY1 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC18.27■□□□□ 0.52
TMEM88Q6PEY1 LINC01971-201ENST00000617888 1048 ntBASIC18.27■□□□□ 0.52
TMEM88Q6PEY1 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TMEM88Q6PEY1 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TMEM88Q6PEY1 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
TMEM88Q6PEY1 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TMEM88Q6PEY1 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TMEM88Q6PEY1 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
TMEM88Q6PEY1 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TMEM88Q6PEY1 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TMEM88Q6PEY1 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM88Q6PEY1 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.26■□□□□ 0.51
TMEM88Q6PEY1 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM88Q6PEY1 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
TMEM88Q6PEY1 HLA-V-202ENST00000446817 847 ntBASIC18.26■□□□□ 0.51
TMEM88Q6PEY1 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC18.26■□□□□ 0.51
TMEM88Q6PEY1 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TMEM88Q6PEY1 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.26■□□□□ 0.51
TMEM88Q6PEY1 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM88Q6PEY1 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM88Q6PEY1 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM88Q6PEY1 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.26■□□□□ 0.51
TMEM88Q6PEY1 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM88Q6PEY1 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.26■□□□□ 0.51
TMEM88Q6PEY1 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TMEM88Q6PEY1 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
TMEM88Q6PEY1 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.25■□□□□ 0.51
TMEM88Q6PEY1 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TMEM88Q6PEY1 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TMEM88Q6PEY1 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC18.25■□□□□ 0.51
TMEM88Q6PEY1 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.25■□□□□ 0.51
TMEM88Q6PEY1 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
TMEM88Q6PEY1 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM88Q6PEY1 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM88Q6PEY1 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM88Q6PEY1 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM88Q6PEY1 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
TMEM88Q6PEY1 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM88Q6PEY1 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.24■□□□□ 0.51
TMEM88Q6PEY1 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM88Q6PEY1 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM88Q6PEY1 RNF166-209ENST00000567844 633 ntTSL 5 BASIC18.24■□□□□ 0.51
TMEM88Q6PEY1 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM88Q6PEY1 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM88Q6PEY1 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM88Q6PEY1 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM88Q6PEY1 AF106564.1-201ENST00000607058 2553 ntBASIC18.24■□□□□ 0.51
TMEM88Q6PEY1 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM88Q6PEY1 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC18.23■□□□□ 0.51
TMEM88Q6PEY1 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM88Q6PEY1 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM88Q6PEY1 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM88Q6PEY1 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.23■□□□□ 0.51
TMEM88Q6PEY1 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC18.23■□□□□ 0.51
TMEM88Q6PEY1 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM88Q6PEY1 MBP-237ENST00000579129 1052 ntTSL 5 BASIC18.23■□□□□ 0.51
TMEM88Q6PEY1 CALM3-209ENST00000597743 577 ntTSL 4 BASIC18.23■□□□□ 0.51
TMEM88Q6PEY1 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.23■□□□□ 0.51
TMEM88Q6PEY1 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM88Q6PEY1 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM88Q6PEY1 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM88Q6PEY1 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM88Q6PEY1 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM88Q6PEY1 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM88Q6PEY1 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
TMEM88Q6PEY1 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM88Q6PEY1 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM88Q6PEY1 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.22■□□□□ 0.51
TMEM88Q6PEY1 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.22■□□□□ 0.51
TMEM88Q6PEY1 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC18.22■□□□□ 0.51
TMEM88Q6PEY1 DUX4L11-201ENST00000611504 1267 ntBASIC18.22■□□□□ 0.51
TMEM88Q6PEY1 DUX4L12-201ENST00000614593 1267 ntBASIC18.22■□□□□ 0.51
TMEM88Q6PEY1 DUX4L14-201ENST00000621227 1267 ntBASIC18.22■□□□□ 0.51
TMEM88Q6PEY1 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TMEM88Q6PEY1 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM88Q6PEY1 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM88Q6PEY1 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC18.22■□□□□ 0.51
TMEM88Q6PEY1 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM88Q6PEY1 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC18.21■□□□□ 0.51
TMEM88Q6PEY1 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TMEM88Q6PEY1 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM88Q6PEY1 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM88Q6PEY1 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TMEM88Q6PEY1 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.21■□□□□ 0.51
TMEM88Q6PEY1 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC18.21■□□□□ 0.51
TMEM88Q6PEY1 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC18.21■□□□□ 0.51
TMEM88Q6PEY1 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM88Q6PEY1 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM88Q6PEY1 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM88Q6PEY1 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TMEM88Q6PEY1 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM88Q6PEY1 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM88Q6PEY1 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms