Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LPCAT4Q643R3 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.47■■□□□ 1.03
LPCAT4Q643R3 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.47■■□□□ 1.03
LPCAT4Q643R3 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.47■■□□□ 1.03
LPCAT4Q643R3 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LPCAT4Q643R3 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LPCAT4Q643R3 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LPCAT4Q643R3 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LPCAT4Q643R3 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LPCAT4Q643R3 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LPCAT4Q643R3 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LPCAT4Q643R3 AC008813.1-201ENST00000536597 885 ntBASIC21.46■■□□□ 1.03
LPCAT4Q643R3 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
LPCAT4Q643R3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LPCAT4Q643R3 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LPCAT4Q643R3 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
LPCAT4Q643R3 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LPCAT4Q643R3 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
LPCAT4Q643R3 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.46■■□□□ 1.03
LPCAT4Q643R3 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.45■■□□□ 1.02
LPCAT4Q643R3 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LPCAT4Q643R3 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
LPCAT4Q643R3 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.44■■□□□ 1.02
LPCAT4Q643R3 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
LPCAT4Q643R3 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
LPCAT4Q643R3 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.44■■□□□ 1.02
LPCAT4Q643R3 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.44■■□□□ 1.02
LPCAT4Q643R3 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
LPCAT4Q643R3 AC044849.2-201ENST00000606596 710 ntBASIC21.44■■□□□ 1.02
LPCAT4Q643R3 NRG1-221ENST00000614767 762 ntTSL 5 BASIC21.44■■□□□ 1.02
LPCAT4Q643R3 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.44■■□□□ 1.02
LPCAT4Q643R3 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LPCAT4Q643R3 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
LPCAT4Q643R3 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.43■■□□□ 1.02
LPCAT4Q643R3 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
LPCAT4Q643R3 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LPCAT4Q643R3 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LPCAT4Q643R3 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.43■■□□□ 1.02
LPCAT4Q643R3 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.43■■□□□ 1.02
LPCAT4Q643R3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
LPCAT4Q643R3 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.43■■□□□ 1.02
LPCAT4Q643R3 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.43■■□□□ 1.02
LPCAT4Q643R3 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
LPCAT4Q643R3 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LPCAT4Q643R3 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
LPCAT4Q643R3 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LPCAT4Q643R3 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
LPCAT4Q643R3 AL162393.1-201ENST00000437852 946 ntBASIC21.42■■□□□ 1.02
LPCAT4Q643R3 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
LPCAT4Q643R3 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.42■■□□□ 1.02
LPCAT4Q643R3 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.42■■□□□ 1.02
LPCAT4Q643R3 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LPCAT4Q643R3 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LPCAT4Q643R3 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.41■■□□□ 1.02
LPCAT4Q643R3 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LPCAT4Q643R3 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LPCAT4Q643R3 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
LPCAT4Q643R3 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
LPCAT4Q643R3 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.41■■□□□ 1.02
LPCAT4Q643R3 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
LPCAT4Q643R3 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.41■■□□□ 1.02
LPCAT4Q643R3 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.41■■□□□ 1.02
LPCAT4Q643R3 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.41■■□□□ 1.02
LPCAT4Q643R3 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LPCAT4Q643R3 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.4■■□□□ 1.02
LPCAT4Q643R3 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LPCAT4Q643R3 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.4■■□□□ 1.02
LPCAT4Q643R3 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LPCAT4Q643R3 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
LPCAT4Q643R3 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LPCAT4Q643R3 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
LPCAT4Q643R3 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.4■■□□□ 1.02
LPCAT4Q643R3 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC21.4■■□□□ 1.02
LPCAT4Q643R3 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LPCAT4Q643R3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
LPCAT4Q643R3 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LPCAT4Q643R3 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LPCAT4Q643R3 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.4■■□□□ 1.02
LPCAT4Q643R3 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
LPCAT4Q643R3 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
LPCAT4Q643R3 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
LPCAT4Q643R3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
LPCAT4Q643R3 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.39■■□□□ 1.01
LPCAT4Q643R3 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.39■■□□□ 1.01
LPCAT4Q643R3 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LPCAT4Q643R3 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LPCAT4Q643R3 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
LPCAT4Q643R3 PKD1P6-201ENST00000343738 4769 ntBASIC21.39■■□□□ 1.01
LPCAT4Q643R3 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LPCAT4Q643R3 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.39■■□□□ 1.01
LPCAT4Q643R3 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.38■■□□□ 1.01
LPCAT4Q643R3 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.38■■□□□ 1.01
LPCAT4Q643R3 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
LPCAT4Q643R3 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
LPCAT4Q643R3 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.38■■□□□ 1.01
LPCAT4Q643R3 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LPCAT4Q643R3 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LPCAT4Q643R3 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LPCAT4Q643R3 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LPCAT4Q643R3 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms