Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CDKAL1Q5VV42 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CDKAL1Q5VV42 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CDKAL1Q5VV42 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CDKAL1Q5VV42 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC25.05■■□□□ 1.6
CDKAL1Q5VV42 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CDKAL1Q5VV42 AL117328.2-201ENST00000624617 1940 ntBASIC25.05■■□□□ 1.6
CDKAL1Q5VV42 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC25.05■■□□□ 1.6
CDKAL1Q5VV42 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CDKAL1Q5VV42 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CDKAL1Q5VV42 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
CDKAL1Q5VV42 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CDKAL1Q5VV42 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CDKAL1Q5VV42 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC25.04■■□□□ 1.6
CDKAL1Q5VV42 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC25.04■■□□□ 1.6
CDKAL1Q5VV42 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC25.03■■□□□ 1.6
CDKAL1Q5VV42 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CDKAL1Q5VV42 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CDKAL1Q5VV42 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CDKAL1Q5VV42 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
CDKAL1Q5VV42 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CDKAL1Q5VV42 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC25.03■■□□□ 1.6
CDKAL1Q5VV42 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CDKAL1Q5VV42 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CDKAL1Q5VV42 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC25.02■■□□□ 1.6
CDKAL1Q5VV42 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
CDKAL1Q5VV42 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
CDKAL1Q5VV42 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
CDKAL1Q5VV42 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC25.02■■□□□ 1.6
CDKAL1Q5VV42 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CDKAL1Q5VV42 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC25.02■■□□□ 1.6
CDKAL1Q5VV42 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CDKAL1Q5VV42 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
CDKAL1Q5VV42 C1orf229-201ENST00000623686 2258 ntBASIC25.02■■□□□ 1.6
CDKAL1Q5VV42 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CDKAL1Q5VV42 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CDKAL1Q5VV42 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CDKAL1Q5VV42 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
CDKAL1Q5VV42 AC233723.2-201ENST00000623798 2106 ntBASIC25.01■■□□□ 1.59
CDKAL1Q5VV42 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CDKAL1Q5VV42 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
CDKAL1Q5VV42 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC25.01■■□□□ 1.59
CDKAL1Q5VV42 GAK-223ENST00000628912 497 ntTSL 5 BASIC25.01■■□□□ 1.59
CDKAL1Q5VV42 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CDKAL1Q5VV42 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
CDKAL1Q5VV42 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC25.01■■□□□ 1.59
CDKAL1Q5VV42 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CDKAL1Q5VV42 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CDKAL1Q5VV42 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CDKAL1Q5VV42 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
CDKAL1Q5VV42 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC25.01■■□□□ 1.59
CDKAL1Q5VV42 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CDKAL1Q5VV42 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC25■■□□□ 1.59
CDKAL1Q5VV42 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
CDKAL1Q5VV42 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC25■■□□□ 1.59
CDKAL1Q5VV42 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CDKAL1Q5VV42 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
CDKAL1Q5VV42 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC25■■□□□ 1.59
CDKAL1Q5VV42 HYI-210ENST00000486909 905 ntTSL 5 BASIC25■■□□□ 1.59
CDKAL1Q5VV42 AC022616.5-201ENST00000518796 181 ntBASIC25■■□□□ 1.59
CDKAL1Q5VV42 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC25■■□□□ 1.59
CDKAL1Q5VV42 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC25■■□□□ 1.59
CDKAL1Q5VV42 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CDKAL1Q5VV42 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
CDKAL1Q5VV42 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CDKAL1Q5VV42 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
CDKAL1Q5VV42 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC24.99■■□□□ 1.59
CDKAL1Q5VV42 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
CDKAL1Q5VV42 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC24.99■■□□□ 1.59
CDKAL1Q5VV42 STK32C-205ENST00000456004 607 ntTSL 2 BASIC24.99■■□□□ 1.59
CDKAL1Q5VV42 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC24.99■■□□□ 1.59
CDKAL1Q5VV42 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CDKAL1Q5VV42 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
CDKAL1Q5VV42 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
CDKAL1Q5VV42 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
CDKAL1Q5VV42 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
CDKAL1Q5VV42 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC24.98■■□□□ 1.59
CDKAL1Q5VV42 MTX2-204ENST00000443241 799 ntTSL 3 BASIC24.98■■□□□ 1.59
CDKAL1Q5VV42 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC24.98■■□□□ 1.59
CDKAL1Q5VV42 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
CDKAL1Q5VV42 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
CDKAL1Q5VV42 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CDKAL1Q5VV42 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CDKAL1Q5VV42 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
CDKAL1Q5VV42 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC24.97■■□□□ 1.59
CDKAL1Q5VV42 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CDKAL1Q5VV42 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC24.97■■□□□ 1.59
CDKAL1Q5VV42 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CDKAL1Q5VV42 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
CDKAL1Q5VV42 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC24.97■■□□□ 1.59
CDKAL1Q5VV42 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CDKAL1Q5VV42 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CDKAL1Q5VV42 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC24.97■■□□□ 1.59
CDKAL1Q5VV42 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC24.97■■□□□ 1.59
CDKAL1Q5VV42 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CDKAL1Q5VV42 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CDKAL1Q5VV42 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC24.96■■□□□ 1.59
CDKAL1Q5VV42 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CDKAL1Q5VV42 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC24.96■■□□□ 1.59
CDKAL1Q5VV42 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms