Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
CBWD3Q5JTY5 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC24.7■■□□□ 1.54
CBWD3Q5JTY5 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CBWD3Q5JTY5 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.54
CBWD3Q5JTY5 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC24.7■■□□□ 1.54
CBWD3Q5JTY5 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
CBWD3Q5JTY5 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
CBWD3Q5JTY5 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
CBWD3Q5JTY5 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.54
CBWD3Q5JTY5 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CBWD3Q5JTY5 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CBWD3Q5JTY5 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CBWD3Q5JTY5 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CBWD3Q5JTY5 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CBWD3Q5JTY5 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CBWD3Q5JTY5 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CBWD3Q5JTY5 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CBWD3Q5JTY5 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
CBWD3Q5JTY5 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
CBWD3Q5JTY5 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
CBWD3Q5JTY5 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
CBWD3Q5JTY5 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC24.68■■□□□ 1.54
CBWD3Q5JTY5 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CBWD3Q5JTY5 BX664725.1-201ENST00000438252 379 ntBASIC24.68■■□□□ 1.54
CBWD3Q5JTY5 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC24.68■■□□□ 1.54
CBWD3Q5JTY5 AC009299.2-201ENST00000482477 511 ntBASIC24.68■■□□□ 1.54
CBWD3Q5JTY5 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CBWD3Q5JTY5 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CBWD3Q5JTY5 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
CBWD3Q5JTY5 RARA-203ENST00000394086 2008 ntTSL 2 BASIC24.68■■□□□ 1.54
CBWD3Q5JTY5 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC24.67■■□□□ 1.54
CBWD3Q5JTY5 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC24.67■■□□□ 1.54
CBWD3Q5JTY5 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC24.67■■□□□ 1.54
CBWD3Q5JTY5 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CBWD3Q5JTY5 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CBWD3Q5JTY5 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
CBWD3Q5JTY5 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC24.67■■□□□ 1.54
CBWD3Q5JTY5 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC24.67■■□□□ 1.54
CBWD3Q5JTY5 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC24.67■■□□□ 1.54
CBWD3Q5JTY5 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CBWD3Q5JTY5 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
CBWD3Q5JTY5 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CBWD3Q5JTY5 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
CBWD3Q5JTY5 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CBWD3Q5JTY5 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CBWD3Q5JTY5 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CBWD3Q5JTY5 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CBWD3Q5JTY5 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CBWD3Q5JTY5 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
CBWD3Q5JTY5 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
CBWD3Q5JTY5 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
CBWD3Q5JTY5 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CBWD3Q5JTY5 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
CBWD3Q5JTY5 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC24.65■■□□□ 1.54
CBWD3Q5JTY5 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC24.65■■□□□ 1.54
CBWD3Q5JTY5 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC24.65■■□□□ 1.54
CBWD3Q5JTY5 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CBWD3Q5JTY5 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC24.65■■□□□ 1.54
CBWD3Q5JTY5 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
CBWD3Q5JTY5 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.54
CBWD3Q5JTY5 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CBWD3Q5JTY5 LSM7-203ENST00000585409 512 ntTSL 2 BASIC24.64■■□□□ 1.54
CBWD3Q5JTY5 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CBWD3Q5JTY5 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC24.64■■□□□ 1.53
CBWD3Q5JTY5 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC24.63■■□□□ 1.53
CBWD3Q5JTY5 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CBWD3Q5JTY5 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CBWD3Q5JTY5 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC24.63■■□□□ 1.53
CBWD3Q5JTY5 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CBWD3Q5JTY5 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC24.63■■□□□ 1.53
CBWD3Q5JTY5 CLTA-210ENST00000540080 989 ntTSL 2 BASIC24.63■■□□□ 1.53
CBWD3Q5JTY5 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC24.63■■□□□ 1.53
CBWD3Q5JTY5 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC24.63■■□□□ 1.53
CBWD3Q5JTY5 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC24.63■■□□□ 1.53
CBWD3Q5JTY5 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
CBWD3Q5JTY5 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CBWD3Q5JTY5 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CBWD3Q5JTY5 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC24.63■■□□□ 1.53
CBWD3Q5JTY5 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CBWD3Q5JTY5 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CBWD3Q5JTY5 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CBWD3Q5JTY5 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC24.62■■□□□ 1.53
CBWD3Q5JTY5 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
CBWD3Q5JTY5 Z92544.1-202ENST00000571933 1220 ntBASIC24.62■■□□□ 1.53
CBWD3Q5JTY5 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
CBWD3Q5JTY5 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CBWD3Q5JTY5 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CBWD3Q5JTY5 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
CBWD3Q5JTY5 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC24.61■■□□□ 1.53
CBWD3Q5JTY5 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
CBWD3Q5JTY5 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
CBWD3Q5JTY5 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CBWD3Q5JTY5 AC239859.2-201ENST00000444165 318 ntBASIC24.61■■□□□ 1.53
CBWD3Q5JTY5 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC24.61■■□□□ 1.53
CBWD3Q5JTY5 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC24.61■■□□□ 1.53
CBWD3Q5JTY5 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CBWD3Q5JTY5 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC24.61■■□□□ 1.53
CBWD3Q5JTY5 H19-210ENST00000439725 1929 ntTSL 2 BASIC24.61■■□□□ 1.53
CBWD3Q5JTY5 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CBWD3Q5JTY5 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC24.6■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms