Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
TRIM60Q495X7 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC25.31■■□□□ 1.64
TRIM60Q495X7 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC25.31■■□□□ 1.64
TRIM60Q495X7 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
TRIM60Q495X7 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC25.3■■□□□ 1.64
TRIM60Q495X7 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC25.3■■□□□ 1.64
TRIM60Q495X7 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC25.3■■□□□ 1.64
TRIM60Q495X7 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
TRIM60Q495X7 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
TRIM60Q495X7 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC25.3■■□□□ 1.64
TRIM60Q495X7 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC25.29■■□□□ 1.64
TRIM60Q495X7 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
TRIM60Q495X7 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
TRIM60Q495X7 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TRIM60Q495X7 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
TRIM60Q495X7 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
TRIM60Q495X7 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC25.29■■□□□ 1.64
TRIM60Q495X7 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
TRIM60Q495X7 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
TRIM60Q495X7 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC25.28■■□□□ 1.64
TRIM60Q495X7 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
TRIM60Q495X7 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC25.28■■□□□ 1.64
TRIM60Q495X7 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
TRIM60Q495X7 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
TRIM60Q495X7 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
TRIM60Q495X7 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
TRIM60Q495X7 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
TRIM60Q495X7 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
TRIM60Q495X7 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
TRIM60Q495X7 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
TRIM60Q495X7 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC25.27■■□□□ 1.64
TRIM60Q495X7 AC027612.3-201ENST00000413684 1047 ntBASIC25.27■■□□□ 1.64
TRIM60Q495X7 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC25.27■■□□□ 1.64
TRIM60Q495X7 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC25.27■■□□□ 1.64
TRIM60Q495X7 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
TRIM60Q495X7 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
TRIM60Q495X7 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC25.27■■□□□ 1.64
TRIM60Q495X7 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC25.27■■□□□ 1.64
TRIM60Q495X7 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC25.26■■□□□ 1.63
TRIM60Q495X7 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC25.26■■□□□ 1.63
TRIM60Q495X7 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
TRIM60Q495X7 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC25.26■■□□□ 1.63
TRIM60Q495X7 NKILA-201ENST00000613231 537 ntTSL 4 BASIC25.26■■□□□ 1.63
TRIM60Q495X7 MIR6084-201ENST00000622012 110 ntBASIC25.26■■□□□ 1.63
TRIM60Q495X7 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
TRIM60Q495X7 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC25.26■■□□□ 1.63
TRIM60Q495X7 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
TRIM60Q495X7 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
TRIM60Q495X7 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
TRIM60Q495X7 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
TRIM60Q495X7 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC25.26■■□□□ 1.63
TRIM60Q495X7 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC25.26■■□□□ 1.63
TRIM60Q495X7 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.26■■□□□ 1.63
TRIM60Q495X7 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
TRIM60Q495X7 AC010501.1-201ENST00000606270 1962 ntBASIC25.25■■□□□ 1.63
TRIM60Q495X7 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
TRIM60Q495X7 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC25.25■■□□□ 1.63
TRIM60Q495X7 AC123595.1-201ENST00000440769 1046 ntBASIC25.25■■□□□ 1.63
TRIM60Q495X7 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
TRIM60Q495X7 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
TRIM60Q495X7 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
TRIM60Q495X7 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
TRIM60Q495X7 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
TRIM60Q495X7 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC25.24■■□□□ 1.63
TRIM60Q495X7 VGF-203ENST00000611537 1622 ntTSL 5 BASIC25.24■■□□□ 1.63
TRIM60Q495X7 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
TRIM60Q495X7 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC25.24■■□□□ 1.63
TRIM60Q495X7 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
TRIM60Q495X7 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
TRIM60Q495X7 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
TRIM60Q495X7 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
TRIM60Q495X7 GXYLT1P2-201ENST00000433312 1230 ntBASIC25.24■■□□□ 1.63
TRIM60Q495X7 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
TRIM60Q495X7 pRNA.6-201ENST00000610482 90 ntBASIC25.24■■□□□ 1.63
TRIM60Q495X7 pRNA.5-201ENST00000612139 90 ntBASIC25.24■■□□□ 1.63
TRIM60Q495X7 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC25.24■■□□□ 1.63
TRIM60Q495X7 pRNA.11-201ENST00000618423 90 ntBASIC25.24■■□□□ 1.63
TRIM60Q495X7 pRNA.13-201ENST00000619112 90 ntBASIC25.24■■□□□ 1.63
TRIM60Q495X7 AL358852.1-201ENST00000623174 1268 ntBASIC25.24■■□□□ 1.63
TRIM60Q495X7 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC25.24■■□□□ 1.63
TRIM60Q495X7 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
TRIM60Q495X7 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
TRIM60Q495X7 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC25.23■■□□□ 1.63
TRIM60Q495X7 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC25.23■■□□□ 1.63
TRIM60Q495X7 AL022069.1-201ENST00000568025 1636 ntBASIC25.23■■□□□ 1.63
TRIM60Q495X7 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
TRIM60Q495X7 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC25.23■■□□□ 1.63
TRIM60Q495X7 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC25.23■■□□□ 1.63
TRIM60Q495X7 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC25.23■■□□□ 1.63
TRIM60Q495X7 VPS53-216ENST00000574029 585 ntTSL 4 BASIC25.23■■□□□ 1.63
TRIM60Q495X7 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC25.23■■□□□ 1.63
TRIM60Q495X7 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC25.23■■□□□ 1.63
TRIM60Q495X7 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
TRIM60Q495X7 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
TRIM60Q495X7 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
TRIM60Q495X7 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
TRIM60Q495X7 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
TRIM60Q495X7 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
TRIM60Q495X7 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC25.21■■□□□ 1.63
TRIM60Q495X7 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms