Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
PDS5AQ29RF7 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC27.6■■■□□ 2.01
PDS5AQ29RF7 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
PDS5AQ29RF7 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC27.59■■■□□ 2.01
PDS5AQ29RF7 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
PDS5AQ29RF7 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
PDS5AQ29RF7 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC27.59■■■□□ 2.01
PDS5AQ29RF7 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
PDS5AQ29RF7 SHF-207ENST00000560540 2062 ntTSL 5 BASIC27.59■■■□□ 2.01
PDS5AQ29RF7 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC27.59■■■□□ 2.01
PDS5AQ29RF7 PBX2P1-201ENST00000493219 1291 ntBASIC27.59■■■□□ 2.01
PDS5AQ29RF7 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC27.59■■■□□ 2.01
PDS5AQ29RF7 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC27.59■■■□□ 2.01
PDS5AQ29RF7 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
PDS5AQ29RF7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC27.58■■■□□ 2.01
PDS5AQ29RF7 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC27.57■■■□□ 2
PDS5AQ29RF7 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
PDS5AQ29RF7 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
PDS5AQ29RF7 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
PDS5AQ29RF7 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC27.57■■■□□ 2
PDS5AQ29RF7 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC27.57■■■□□ 2
PDS5AQ29RF7 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC27.56■■■□□ 2
PDS5AQ29RF7 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC27.56■■■□□ 2
PDS5AQ29RF7 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC27.56■■■□□ 2
PDS5AQ29RF7 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC27.56■■■□□ 2
PDS5AQ29RF7 AC024257.2-201ENST00000549699 147 ntBASIC27.56■■■□□ 2
PDS5AQ29RF7 AC020928.2-201ENST00000588717 2197 ntBASIC27.56■■■□□ 2
PDS5AQ29RF7 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC27.55■■■□□ 2
PDS5AQ29RF7 USF2-207ENST00000595068 1612 ntTSL 5 BASIC27.55■■■□□ 2
PDS5AQ29RF7 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC27.55■■■□□ 2
PDS5AQ29RF7 EDA-201ENST00000338901 1233 ntBASIC27.55■■■□□ 2
PDS5AQ29RF7 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC27.55■■■□□ 2
PDS5AQ29RF7 AC241377.3-202ENST00000626088 1088 ntBASIC27.55■■■□□ 2
PDS5AQ29RF7 AC241585.3-202ENST00000628937 1088 ntBASIC27.55■■■□□ 2
PDS5AQ29RF7 AC245100.8-202ENST00000629247 1058 ntBASIC27.55■■■□□ 2
PDS5AQ29RF7 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC27.55■■■□□ 2
PDS5AQ29RF7 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC27.54■■■□□ 2
PDS5AQ29RF7 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC27.54■■■□□ 2
PDS5AQ29RF7 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
PDS5AQ29RF7 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC27.54■■■□□ 2
PDS5AQ29RF7 AL138724.1-201ENST00000606771 1088 ntBASIC27.54■■■□□ 2
PDS5AQ29RF7 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
PDS5AQ29RF7 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC27.54■■■□□ 2
PDS5AQ29RF7 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC27.54■■■□□ 2
PDS5AQ29RF7 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
PDS5AQ29RF7 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
PDS5AQ29RF7 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC27.54■■■□□ 2
PDS5AQ29RF7 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC27.54■■■□□ 2
PDS5AQ29RF7 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
PDS5AQ29RF7 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC27.53■■■□□ 2
PDS5AQ29RF7 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC27.53■■■□□ 2
PDS5AQ29RF7 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC27.53■■■□□ 2
PDS5AQ29RF7 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
PDS5AQ29RF7 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC27.53■■■□□ 2
PDS5AQ29RF7 SUDS3P1-201ENST00000505831 966 ntBASIC27.53■■■□□ 2
PDS5AQ29RF7 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC27.53■■■□□ 2
PDS5AQ29RF7 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC27.53■■■□□ 2
PDS5AQ29RF7 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC27.52■■■□□ 2
PDS5AQ29RF7 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC27.52■■■□□ 2
PDS5AQ29RF7 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC27.52■■■□□ 2
PDS5AQ29RF7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC27.52■■■□□ 2
PDS5AQ29RF7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
PDS5AQ29RF7 AC099791.2-201ENST00000605725 427 ntBASIC27.52■■■□□ 2
PDS5AQ29RF7 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC27.52■■■□□ 2
PDS5AQ29RF7 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC27.52■■■□□ 2
PDS5AQ29RF7 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC27.52■■■□□ 2
PDS5AQ29RF7 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
PDS5AQ29RF7 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC27.52■■■□□ 2
PDS5AQ29RF7 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC27.51■■□□□ 1.99
PDS5AQ29RF7 SYT6-210ENST00000641643 1587 ntBASIC27.51■■□□□ 1.99
PDS5AQ29RF7 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC27.51■■□□□ 1.99
PDS5AQ29RF7 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC27.51■■□□□ 1.99
PDS5AQ29RF7 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC27.51■■□□□ 1.99
PDS5AQ29RF7 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
PDS5AQ29RF7 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
PDS5AQ29RF7 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC27.5■■□□□ 1.99
PDS5AQ29RF7 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC27.5■■□□□ 1.99
PDS5AQ29RF7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC27.5■■□□□ 1.99
PDS5AQ29RF7 SERBP1P1-201ENST00000396021 1160 ntBASIC27.5■■□□□ 1.99
PDS5AQ29RF7 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC27.5■■□□□ 1.99
PDS5AQ29RF7 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC27.5■■□□□ 1.99
PDS5AQ29RF7 AC011298.3-201ENST00000615796 283 ntBASIC27.5■■□□□ 1.99
PDS5AQ29RF7 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC27.5■■□□□ 1.99
PDS5AQ29RF7 TMEM202-AS1-202ENST00000565181 2325 ntBASIC27.5■■□□□ 1.99
PDS5AQ29RF7 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC27.5■■□□□ 1.99
PDS5AQ29RF7 VGF-203ENST00000611537 1622 ntTSL 5 BASIC27.5■■□□□ 1.99
PDS5AQ29RF7 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC27.5■■□□□ 1.99
PDS5AQ29RF7 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
PDS5AQ29RF7 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
PDS5AQ29RF7 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC27.49■■□□□ 1.99
PDS5AQ29RF7 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
PDS5AQ29RF7 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
PDS5AQ29RF7 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC27.47■■□□□ 1.99
PDS5AQ29RF7 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
PDS5AQ29RF7 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC27.47■■□□□ 1.99
PDS5AQ29RF7 PTCHD3P2-201ENST00000424937 1205 ntBASIC27.47■■□□□ 1.99
PDS5AQ29RF7 AL355001.2-201ENST00000620617 1191 ntBASIC27.47■■□□□ 1.99
PDS5AQ29RF7 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC27.47■■□□□ 1.99
PDS5AQ29RF7 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
PDS5AQ29RF7 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC27.46■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms