Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 EEF1D-249ENST00000533749 633 ntTSL 515.45■□□□□ 0.068e-7■■■■□ 23.4
LSM11P83369 EEF1D-224ENST00000529007 861 ntTSL 215.05■□□□□ -03e-11■■■■□ 23.4
LSM11P83369 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.05■□□□□ -03e-11■■■■□ 23.4
LSM11P83369 EEF1D-206ENST00000524397 957 ntTSL 315.05■□□□□ -03e-11■■■■□ 23.4
LSM11P83369 EEF1D-250ENST00000533833 831 ntTSL 514.82□□□□□ -0.043e-11■■■■□ 23.4
LSM11P83369 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.073e-11■■■■□ 23.4
LSM11P83369 EEF1D-244ENST00000532543 791 ntTSL 314.31□□□□□ -0.128e-7■■■■□ 23.4
LSM11P83369 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.213e-11■■■■□ 23.4
LSM11P83369 EEF1D-230ENST00000530191 853 ntTSL 313.4□□□□□ -0.268e-7■■■■□ 23.4
LSM11P83369 EEF1D-251ENST00000534232 817 ntTSL 513.36□□□□□ -0.278e-7■■■■□ 23.4
LSM11P83369 EEF1D-252ENST00000534377 617 ntTSL 212.78□□□□□ -0.363e-11■■■■□ 23.4
LSM11P83369 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.433e-11■■■■□ 23.4
LSM11P83369 EEF1D-247ENST00000533204 842 ntTSL 211.96□□□□□ -0.498e-7■■■■□ 23.4
LSM11P83369 EEF1D-253ENST00000534380 1001 ntTSL 511.87□□□□□ -0.513e-11■■■■□ 23.4
LSM11P83369 EEF1D-236ENST00000531218 787 ntTSL 311.87□□□□□ -0.518e-7■■■■□ 23.4
LSM11P83369 EEF1D-215ENST00000526340 770 ntTSL 311.61□□□□□ -0.558e-7■■■■□ 23.4
LSM11P83369 EEF1D-248ENST00000533494 758 ntTSL 511.45□□□□□ -0.588e-7■■■■□ 23.4
LSM11P83369 EEF1D-226ENST00000529516 473 ntTSL 38□□□□□ -1.138e-7■■■■□ 23.4
LSM11P83369 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.199e-9■■■■□ 23.4
LSM11P83369 BSG-209ENST00000574970 570 ntTSL 418.81■□□□□ 0.61e-6■■■■□ 23.4
LSM11P83369 BSG-211ENST00000576984 544 ntTSL 417.12■□□□□ 0.331e-6■■■■□ 23.4
LSM11P83369 BSG-208ENST00000573784 559 ntTSL 416.58■□□□□ 0.241e-6■■■■□ 23.4
LSM11P83369 NDUFAF6-206ENST00000518258 1373 ntTSL 221.21■□□□□ 0.998e-18■■■■□ 23.4
LSM11P83369 NDUFAF6-211ENST00000520757 1474 ntTSL 220.01■□□□□ 0.798e-18■■■■□ 23.4
LSM11P83369 NDUFAF6-205ENST00000517976 1196 ntTSL 520.01■□□□□ 0.798e-18■■■■□ 23.4
LSM11P83369 NDUFAF6-204ENST00000454358 946 ntTSL 519.78■□□□□ 0.768e-18■■■■□ 23.4
LSM11P83369 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.658e-18■■■■□ 23.4
LSM11P83369 NDUFAF6-201ENST00000396111 1869 ntTSL 5 BASIC12.42□□□□□ -0.428e-18■■■■□ 23.4
LSM11P83369 NDUFAF6-202ENST00000396113 2549 ntTSL 5 BASIC11.52□□□□□ -0.568e-18■■■■□ 23.4
LSM11P83369 NDUFAF6-216ENST00000523184 732 ntTSL 310.13□□□□□ -0.798e-18■■■■□ 23.4
LSM11P83369 EEF1D-216ENST00000526710 996 ntTSL 218.07■□□□□ 0.488e-7■■■■□ 23.3
LSM11P83369 EEF1D-228ENST00000529832 600 ntTSL 416.13■□□□□ 0.178e-7■■■■□ 23.3
LSM11P83369 EEF1D-209ENST00000524900 343 ntTSL 515.08■□□□□ 08e-7■■■■□ 23.3
LSM11P83369 EEF1D-231ENST00000530306 583 ntTSL 213.55□□□□□ -0.248e-7■■■■□ 23.3
LSM11P83369 EEF1D-211ENST00000525261 559 ntTSL 212.89□□□□□ -0.358e-7■■■■□ 23.3
LSM11P83369 EEF1D-245ENST00000532596 761 ntTSL 412.89□□□□□ -0.358e-7■■■■□ 23.3
LSM11P83369 EEF1D-233ENST00000530545 616 ntTSL 411.85□□□□□ -0.518e-7■■■■□ 23.3
LSM11P83369 EEF1D-220ENST00000528303 558 ntTSL 411.32□□□□□ -0.68e-7■■■■□ 23.3
LSM11P83369 EEF1D-254ENST00000534475 538 ntTSL 411.05□□□□□ -0.648e-7■■■■□ 23.3
LSM11P83369 EEF1D-242ENST00000531953 506 ntTSL 410.72□□□□□ -0.698e-7■■■■□ 23.3
LSM11P83369 EEF1D-213ENST00000526133 367 ntTSL 28.6□□□□□ -1.038e-7■■■■□ 23.3
LSM11P83369 EEF1D-255ENST00000534804 555 ntTSL 47.33□□□□□ -1.248e-7■■■■□ 23.3
LSM11P83369 ARFRP1-205ENST00000610414 1251 ntTSL 215.49■□□□□ 0.072e-11■■■■□ 23.3
LSM11P83369 ARFRP1-209ENST00000612772 1375 ntTSL 314.9□□□□□ -0.022e-11■■■■□ 23.3
LSM11P83369 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.193e-7■■■■□ 23.3
LSM11P83369 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.363e-7■■■■□ 23.3
LSM11P83369 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.553e-7■■■■□ 23.3
LSM11P83369 ING4-218ENST00000619641 1280 ntTSL 1 (best) BASIC9.89□□□□□ -0.833e-7■■■■□ 23.3
LSM11P83369 ING4-214ENST00000486287 797 ntTSL 58.93□□□□□ -0.983e-7■■■■□ 23.3
LSM11P83369 AMDHD2-210ENST00000565570 1844 ntTSL 517.11■□□□□ 0.337e-9■■■■□ 23.3
LSM11P83369 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.96■□□□□ 0.318e-14■■■■□ 23.3
LSM11P83369 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC12.8□□□□□ -0.367e-9■■■■□ 23.3
LSM11P83369 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.06■□□□□ 0.325e-12■■■■□ 23.3
LSM11P83369 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.295e-12■■■■□ 23.3
LSM11P83369 RBM26-204ENST00000449987 3662 ntTSL 39.07□□□□□ -0.965e-12■■■■□ 23.3
LSM11P83369 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.343e-10■■■■□ 23.3
LSM11P83369 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.43e-10■■■■□ 23.3
LSM11P83369 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.43e-10■■■■□ 23.3
LSM11P83369 GTF2I-218ENST00000620879 4352 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.623e-10■■■■□ 23.3
LSM11P83369 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC12.34□□□□□ -0.433e-6■■■■□ 23.3
LSM11P83369 FUS-203ENST00000474990 827 ntTSL 319.7■□□□□ 0.744e-11■■■■□ 23.3
LSM11P83369 CCDC137-206ENST00000575223 1888 ntTSL 520.03■□□□□ 0.83e-6■■■■□ 23.3
LSM11P83369 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.33e-6■■■■□ 23.3
LSM11P83369 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC23.6■■□□□ 1.371e-6■■■■□ 23.2
LSM11P83369 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.041e-6■■■■□ 23.2
LSM11P83369 VPS16-201ENST00000380443 1825 ntTSL 1 (best)21.45■■□□□ 1.032e-6■■■■□ 23.2
LSM11P83369 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.792e-6■■■■□ 23.2
LSM11P83369 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.382e-6■■■■□ 23.2
LSM11P83369 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.6■□□□□ 0.092e-6■■■■□ 23.2
LSM11P83369 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.48■□□□□ 0.079e-7■■■■□ 23.2
LSM11P83369 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.37■□□□□ 0.052e-6■■■■□ 23.2
LSM11P83369 ERF-206ENST00000596818 566 ntTSL 314.29□□□□□ -0.122e-6■■■■□ 23.2
LSM11P83369 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.11□□□□□ -0.159e-7■■■■□ 23.2
LSM11P83369 NOP2-213ENST00000542015 1002 ntTSL 313.54□□□□□ -0.242e-6■■■■□ 23.2
LSM11P83369 COPS7B-210ENST00000413197 2442 ntTSL 212.99□□□□□ -0.339e-7■■■■□ 23.2
LSM11P83369 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC12.91□□□□□ -0.349e-7■■■■□ 23.2
LSM11P83369 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC12.82□□□□□ -0.369e-7■■■■□ 23.2
LSM11P83369 NOP2-212ENST00000541778 3038 ntTSL 2 BASIC12.73□□□□□ -0.372e-6■■■■□ 23.2
LSM11P83369 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.399e-7■■■■□ 23.2
LSM11P83369 COPS7B-221ENST00000488111 2381 ntTSL 1 (best)12.5□□□□□ -0.412e-6■■■■□ 23.2
LSM11P83369 VPS16-202ENST00000380445 2750 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.532e-6■■■■□ 23.2
LSM11P83369 PNPLA6-220ENST00000600737 4195 ntTSL 1 (best) BASIC11.59□□□□□ -0.552e-6■■■■□ 23.2
LSM11P83369 NOP2-203ENST00000399466 2701 ntTSL 1 (best) BASIC11.48□□□□□ -0.572e-6■■■■□ 23.2
LSM11P83369 NOP2-201ENST00000322166 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.592e-6■■■■□ 23.2
LSM11P83369 RMI2-202ENST00000572173 1865 ntTSL 1 (best) BASIC11.21□□□□□ -0.622e-6■■■■□ 23.2
LSM11P83369 CABIN1-211ENST00000485008 771 ntTSL 311.02□□□□□ -0.652e-6■■■■□ 23.2
LSM11P83369 VPS16-206ENST00000466415 708 ntTSL 211.01□□□□□ -0.652e-6■■■■□ 23.2
LSM11P83369 NOP2-223ENST00000620535 2791 ntTSL 1 (best) BASIC10.99□□□□□ -0.652e-6■■■■□ 23.2
LSM11P83369 TUBGCP2-201ENST00000252936 3885 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.662e-6■■■■□ 23.2
LSM11P83369 COPS7B-209ENST00000412922 1935 ntTSL 510.65□□□□□ -0.79e-7■■■■□ 23.2
LSM11P83369 CABIN1-201ENST00000263119 7222 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.712e-6■■■■□ 23.2
LSM11P83369 DDX11-211ENST00000538345 498 ntTSL 510.58□□□□□ -0.722e-6■■■■□ 23.2
LSM11P83369 CABIN1-203ENST00000398319 7480 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.742e-6■■■■□ 23.2
LSM11P83369 COPS7B-217ENST00000461350 3299 ntTSL 210.44□□□□□ -0.742e-6■■■■□ 23.2
LSM11P83369 CABIN1-204ENST00000405822 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.782e-6■■■■□ 23.2
LSM11P83369 COPS7B-213ENST00000449174 668 ntTSL 310.18□□□□□ -0.782e-6■■■■□ 23.2
LSM11P83369 CABIN1-214ENST00000617531 7072 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.842e-6■■■■□ 23.2
LSM11P83369 TIMELESS-201ENST00000229201 4376 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.912e-6■■■■□ 23.2
LSM11P83369 TIMELESS-205ENST00000557589 2784 ntTSL 29.37□□□□□ -0.912e-6■■■■□ 23.2
LSM11P83369 NOP2-207ENST00000537442 2613 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.912e-6■■■■□ 23.2
Retrieved 100 of 11,495 protein–RNA pairs in 56.2 ms