Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.78■□□□□ 0.92
CDC42P60953 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDC42P60953 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDC42P60953 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDC42P60953 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDC42P60953 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CDC42P60953 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDC42P60953 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDC42P60953 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDC42P60953 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDC42P60953 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDC42P60953 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDC42P60953 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.78■□□□□ 0.92
CDC42P60953 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDC42P60953 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDC42P60953 LINC00526-201ENST00000581067 1875 ntBASIC20.77■□□□□ 0.92
CDC42P60953 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDC42P60953 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDC42P60953 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
CDC42P60953 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDC42P60953 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDC42P60953 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDC42P60953 GUSBP5-202ENST00000510805 1989 ntBASIC20.77■□□□□ 0.92
CDC42P60953 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDC42P60953 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDC42P60953 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CDC42P60953 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
CDC42P60953 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CDC42P60953 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDC42P60953 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDC42P60953 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.76■□□□□ 0.91
CDC42P60953 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.75■□□□□ 0.91
CDC42P60953 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDC42P60953 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDC42P60953 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDC42P60953 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CDC42P60953 AC127496.7-201ENST00000625110 1798 ntBASIC20.75■□□□□ 0.91
CDC42P60953 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.75■□□□□ 0.91
CDC42P60953 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.75■□□□□ 0.91
CDC42P60953 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.75■□□□□ 0.91
CDC42P60953 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CDC42P60953 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDC42P60953 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDC42P60953 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.74■□□□□ 0.91
CDC42P60953 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDC42P60953 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDC42P60953 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDC42P60953 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDC42P60953 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.73■□□□□ 0.91
CDC42P60953 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
CDC42P60953 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.73■□□□□ 0.91
CDC42P60953 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDC42P60953 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.73■□□□□ 0.91
CDC42P60953 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.73■□□□□ 0.91
CDC42P60953 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CDC42P60953 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.73■□□□□ 0.91
CDC42P60953 AC007029.1-201ENST00000604183 313 ntBASIC20.73■□□□□ 0.91
CDC42P60953 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDC42P60953 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDC42P60953 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDC42P60953 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDC42P60953 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
CDC42P60953 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDC42P60953 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CDC42P60953 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDC42P60953 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.72■□□□□ 0.91
CDC42P60953 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDC42P60953 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CDC42P60953 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CDC42P60953 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.72■□□□□ 0.91
CDC42P60953 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDC42P60953 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.72■□□□□ 0.91
CDC42P60953 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.72■□□□□ 0.91
CDC42P60953 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDC42P60953 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.71■□□□□ 0.91
CDC42P60953 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDC42P60953 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDC42P60953 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
CDC42P60953 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDC42P60953 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CDC42P60953 RAP2CP1-202ENST00000605179 643 ntBASIC20.71■□□□□ 0.91
CDC42P60953 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CDC42P60953 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDC42P60953 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CDC42P60953 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDC42P60953 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.7■□□□□ 0.9
CDC42P60953 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.7■□□□□ 0.9
CDC42P60953 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.7■□□□□ 0.9
CDC42P60953 ECEL1P1-201ENST00000373592 1742 ntBASIC20.7■□□□□ 0.9
CDC42P60953 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDC42P60953 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDC42P60953 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDC42P60953 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CDC42P60953 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDC42P60953 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
CDC42P60953 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDC42P60953 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDC42P60953 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDC42P60953 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDC42P60953 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms