Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AL033527.3-201ENST00000566366 1196 ntBASIC19.96■□□□□ 0.79
CX3CR1P49238 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CX3CR1P49238 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CX3CR1P49238 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CX3CR1P49238 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.95■□□□□ 0.78
CX3CR1P49238 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CX3CR1P49238 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CX3CR1P49238 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CX3CR1P49238 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.95■□□□□ 0.78
CX3CR1P49238 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CX3CR1P49238 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.95■□□□□ 0.78
CX3CR1P49238 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.95■□□□□ 0.78
CX3CR1P49238 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.95■□□□□ 0.78
CX3CR1P49238 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CX3CR1P49238 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.94■□□□□ 0.78
CX3CR1P49238 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.94■□□□□ 0.78
CX3CR1P49238 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CX3CR1P49238 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CX3CR1P49238 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.94■□□□□ 0.78
CX3CR1P49238 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
CX3CR1P49238 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CX3CR1P49238 KRT18P24-201ENST00000344739 1156 ntBASIC19.94■□□□□ 0.78
CX3CR1P49238 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.94■□□□□ 0.78
CX3CR1P49238 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.94■□□□□ 0.78
CX3CR1P49238 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.94■□□□□ 0.78
CX3CR1P49238 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CX3CR1P49238 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CX3CR1P49238 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CX3CR1P49238 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CX3CR1P49238 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CX3CR1P49238 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CX3CR1P49238 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CX3CR1P49238 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.93■□□□□ 0.78
CX3CR1P49238 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.93■□□□□ 0.78
CX3CR1P49238 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.93■□□□□ 0.78
CX3CR1P49238 MIR4281-201ENST00000580852 62 ntBASIC19.93■□□□□ 0.78
CX3CR1P49238 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.93■□□□□ 0.78
CX3CR1P49238 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CX3CR1P49238 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CX3CR1P49238 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CX3CR1P49238 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CX3CR1P49238 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CX3CR1P49238 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CX3CR1P49238 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CX3CR1P49238 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
CX3CR1P49238 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
CX3CR1P49238 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
CX3CR1P49238 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CX3CR1P49238 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.92■□□□□ 0.78
CX3CR1P49238 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CX3CR1P49238 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CX3CR1P49238 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CX3CR1P49238 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CX3CR1P49238 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CX3CR1P49238 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CX3CR1P49238 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.91■□□□□ 0.78
CX3CR1P49238 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CX3CR1P49238 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.91■□□□□ 0.78
CX3CR1P49238 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.91■□□□□ 0.78
CX3CR1P49238 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.91■□□□□ 0.78
CX3CR1P49238 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CX3CR1P49238 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.91■□□□□ 0.78
CX3CR1P49238 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CX3CR1P49238 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CX3CR1P49238 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CX3CR1P49238 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CX3CR1P49238 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CX3CR1P49238 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CX3CR1P49238 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CX3CR1P49238 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CX3CR1P49238 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.9■□□□□ 0.78
CX3CR1P49238 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CX3CR1P49238 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CX3CR1P49238 ALDH1A3-203ENST00000557963 1670 ntBASIC19.9■□□□□ 0.78
CX3CR1P49238 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CX3CR1P49238 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CX3CR1P49238 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CX3CR1P49238 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CX3CR1P49238 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.9■□□□□ 0.78
CX3CR1P49238 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CX3CR1P49238 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CX3CR1P49238 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CX3CR1P49238 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CX3CR1P49238 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CX3CR1P49238 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CX3CR1P49238 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CX3CR1P49238 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.89■□□□□ 0.77
CX3CR1P49238 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CX3CR1P49238 MIR4508-201ENST00000584178 70 ntBASIC19.89■□□□□ 0.77
CX3CR1P49238 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CX3CR1P49238 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CX3CR1P49238 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CX3CR1P49238 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CX3CR1P49238 AF131216.4-201ENST00000638924 1588 ntBASIC19.89■□□□□ 0.77
CX3CR1P49238 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CX3CR1P49238 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CX3CR1P49238 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CX3CR1P49238 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CX3CR1P49238 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.88■□□□□ 0.77
CX3CR1P49238 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms