Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC1A3P43003 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.9■□□□□ 0.94
SLC1A3P43003 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC1A3P43003 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SLC1A3P43003 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC1A3P43003 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC1A3P43003 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.89■□□□□ 0.94
SLC1A3P43003 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
SLC1A3P43003 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC1A3P43003 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SLC1A3P43003 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC1A3P43003 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.89■□□□□ 0.93
SLC1A3P43003 AL031848.2-201ENST00000607670 837 ntBASIC20.89■□□□□ 0.93
SLC1A3P43003 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.89■□□□□ 0.93
SLC1A3P43003 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC1A3P43003 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SLC1A3P43003 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SLC1A3P43003 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SLC1A3P43003 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC1A3P43003 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC1A3P43003 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC1A3P43003 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC1A3P43003 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC1A3P43003 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.87■□□□□ 0.93
SLC1A3P43003 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SLC1A3P43003 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.87■□□□□ 0.93
SLC1A3P43003 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SLC1A3P43003 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.87■□□□□ 0.93
SLC1A3P43003 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC1A3P43003 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.86■□□□□ 0.93
SLC1A3P43003 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.86■□□□□ 0.93
SLC1A3P43003 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.86■□□□□ 0.93
SLC1A3P43003 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC1A3P43003 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.86■□□□□ 0.93
SLC1A3P43003 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC1A3P43003 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC1A3P43003 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SLC1A3P43003 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SLC1A3P43003 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SLC1A3P43003 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC1A3P43003 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
SLC1A3P43003 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC1A3P43003 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC1A3P43003 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.85■□□□□ 0.93
SLC1A3P43003 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.85■□□□□ 0.93
SLC1A3P43003 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SLC1A3P43003 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC1A3P43003 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SLC1A3P43003 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
SLC1A3P43003 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SLC1A3P43003 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC1A3P43003 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC1A3P43003 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC1A3P43003 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC1A3P43003 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.84■□□□□ 0.93
SLC1A3P43003 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC1A3P43003 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC1A3P43003 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC1A3P43003 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC1A3P43003 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC1A3P43003 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC1A3P43003 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SLC1A3P43003 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
SLC1A3P43003 C9orf163-202ENST00000624034 2573 ntBASIC20.83■□□□□ 0.93
SLC1A3P43003 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SLC1A3P43003 AC137630.3-201ENST00000607245 391 ntBASIC20.83■□□□□ 0.93
SLC1A3P43003 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLC1A3P43003 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
SLC1A3P43003 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLC1A3P43003 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLC1A3P43003 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLC1A3P43003 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.82■□□□□ 0.92
SLC1A3P43003 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.82■□□□□ 0.92
SLC1A3P43003 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
SLC1A3P43003 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC1A3P43003 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLC1A3P43003 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.82■□□□□ 0.92
SLC1A3P43003 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.82■□□□□ 0.92
SLC1A3P43003 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC1A3P43003 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.82■□□□□ 0.92
SLC1A3P43003 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.82■□□□□ 0.92
SLC1A3P43003 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLC1A3P43003 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.82■□□□□ 0.92
SLC1A3P43003 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLC1A3P43003 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC1A3P43003 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLC1A3P43003 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC1A3P43003 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC1A3P43003 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC1A3P43003 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC1A3P43003 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLC1A3P43003 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.81■□□□□ 0.92
SLC1A3P43003 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC1A3P43003 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC1A3P43003 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLC1A3P43003 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.8■□□□□ 0.92
SLC1A3P43003 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC1A3P43003 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC1A3P43003 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.8■□□□□ 0.92
SLC1A3P43003 AC004448.1-201ENST00000458332 883 ntBASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms