Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNCAP37840 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SNCAP37840 MIR6089-201ENST00000616698 64 ntBASIC18.64■□□□□ 0.57
SNCAP37840 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.64■□□□□ 0.57
SNCAP37840 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNCAP37840 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC18.64■□□□□ 0.57
SNCAP37840 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.57
SNCAP37840 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNCAP37840 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.63■□□□□ 0.57
SNCAP37840 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SNCAP37840 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNCAP37840 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC18.63■□□□□ 0.57
SNCAP37840 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNCAP37840 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNCAP37840 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC18.63■□□□□ 0.57
SNCAP37840 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SNCAP37840 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SNCAP37840 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNCAP37840 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNCAP37840 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC18.62■□□□□ 0.57
SNCAP37840 GFER-205ENST00000569451 517 ntTSL 5 BASIC18.62■□□□□ 0.57
SNCAP37840 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
SNCAP37840 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC18.62■□□□□ 0.57
SNCAP37840 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SNCAP37840 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC18.62■□□□□ 0.57
SNCAP37840 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNCAP37840 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC18.62■□□□□ 0.57
SNCAP37840 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNCAP37840 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SNCAP37840 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.61■□□□□ 0.57
SNCAP37840 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNCAP37840 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SNCAP37840 LINC00526-201ENST00000581067 1875 ntBASIC18.61■□□□□ 0.57
SNCAP37840 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNCAP37840 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNCAP37840 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SNCAP37840 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SNCAP37840 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SNCAP37840 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNCAP37840 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNCAP37840 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNCAP37840 AC127496.7-201ENST00000625110 1798 ntBASIC18.6■□□□□ 0.57
SNCAP37840 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.6■□□□□ 0.57
SNCAP37840 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
SNCAP37840 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNCAP37840 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SNCAP37840 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNCAP37840 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNCAP37840 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.6■□□□□ 0.57
SNCAP37840 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNCAP37840 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNCAP37840 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNCAP37840 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
SNCAP37840 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.59■□□□□ 0.57
SNCAP37840 AC007375.3-201ENST00000600936 2314 ntBASIC18.58■□□□□ 0.57
SNCAP37840 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SNCAP37840 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
SNCAP37840 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SNCAP37840 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
SNCAP37840 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.58■□□□□ 0.56
SNCAP37840 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
SNCAP37840 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SNCAP37840 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SNCAP37840 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
SNCAP37840 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SNCAP37840 SLC25A24-204ENST00000569674 2357 ntBASIC18.57■□□□□ 0.56
SNCAP37840 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SNCAP37840 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SNCAP37840 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.57■□□□□ 0.56
SNCAP37840 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNCAP37840 FOXO3B-201ENST00000395675 1928 ntBASIC18.57■□□□□ 0.56
SNCAP37840 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
SNCAP37840 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNCAP37840 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC18.57■□□□□ 0.56
SNCAP37840 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.57■□□□□ 0.56
SNCAP37840 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC18.57■□□□□ 0.56
SNCAP37840 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.57■□□□□ 0.56
SNCAP37840 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC18.57■□□□□ 0.56
SNCAP37840 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNCAP37840 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNCAP37840 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SNCAP37840 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.57■□□□□ 0.56
SNCAP37840 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNCAP37840 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNCAP37840 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNCAP37840 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
SNCAP37840 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SNCAP37840 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNCAP37840 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNCAP37840 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC18.56■□□□□ 0.56
SNCAP37840 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNCAP37840 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNCAP37840 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNCAP37840 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SNCAP37840 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.55■□□□□ 0.56
SNCAP37840 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNCAP37840 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNCAP37840 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNCAP37840 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNCAP37840 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms