Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.89■■□□□ 1.41
PCK1P35558 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.89■■□□□ 1.41
PCK1P35558 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PCK1P35558 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PCK1P35558 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
PCK1P35558 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
PCK1P35558 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
PCK1P35558 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
PCK1P35558 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCK1P35558 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCK1P35558 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.88■■□□□ 1.41
PCK1P35558 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.88■■□□□ 1.41
PCK1P35558 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.87■■□□□ 1.41
PCK1P35558 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.87■■□□□ 1.41
PCK1P35558 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.87■■□□□ 1.41
PCK1P35558 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCK1P35558 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCK1P35558 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC23.87■■□□□ 1.41
PCK1P35558 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PCK1P35558 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.87■■□□□ 1.41
PCK1P35558 AL031848.2-201ENST00000607670 837 ntBASIC23.87■■□□□ 1.41
PCK1P35558 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.87■■□□□ 1.41
PCK1P35558 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
PCK1P35558 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PCK1P35558 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PCK1P35558 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.86■■□□□ 1.41
PCK1P35558 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PCK1P35558 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCK1P35558 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
PCK1P35558 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCK1P35558 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PCK1P35558 ALDH1A3-203ENST00000557963 1670 ntBASIC23.86■■□□□ 1.41
PCK1P35558 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PCK1P35558 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
PCK1P35558 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
PCK1P35558 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCK1P35558 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PCK1P35558 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PCK1P35558 AC004448.1-201ENST00000458332 883 ntBASIC23.85■■□□□ 1.41
PCK1P35558 AC137630.3-201ENST00000607245 391 ntBASIC23.85■■□□□ 1.41
PCK1P35558 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
PCK1P35558 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
PCK1P35558 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
PCK1P35558 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PCK1P35558 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCK1P35558 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
PCK1P35558 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.84■■□□□ 1.41
PCK1P35558 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.84■■□□□ 1.41
PCK1P35558 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCK1P35558 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.84■■□□□ 1.41
PCK1P35558 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PCK1P35558 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCK1P35558 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCK1P35558 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCK1P35558 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCK1P35558 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.84■■□□□ 1.41
PCK1P35558 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.84■■□□□ 1.41
PCK1P35558 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PCK1P35558 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PCK1P35558 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCK1P35558 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.83■■□□□ 1.41
PCK1P35558 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PCK1P35558 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCK1P35558 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PCK1P35558 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCK1P35558 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCK1P35558 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PCK1P35558 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.82■■□□□ 1.4
PCK1P35558 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
PCK1P35558 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCK1P35558 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCK1P35558 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PCK1P35558 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.81■■□□□ 1.4
PCK1P35558 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCK1P35558 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCK1P35558 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
PCK1P35558 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCK1P35558 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCK1P35558 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.8■■□□□ 1.4
PCK1P35558 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
PCK1P35558 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.8■■□□□ 1.4
PCK1P35558 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.8■■□□□ 1.4
PCK1P35558 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCK1P35558 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC23.8■■□□□ 1.4
PCK1P35558 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
PCK1P35558 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.79■■□□□ 1.4
PCK1P35558 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.79■■□□□ 1.4
PCK1P35558 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCK1P35558 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCK1P35558 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCK1P35558 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PCK1P35558 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCK1P35558 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.79■■□□□ 1.4
PCK1P35558 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCK1P35558 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCK1P35558 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PCK1P35558 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
PCK1P35558 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.78■■□□□ 1.4
PCK1P35558 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC23.78■■□□□ 1.4
PCK1P35558 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms