Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC28.99■■■□□ 2.23
RFC4P35249 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC28.99■■■□□ 2.23
RFC4P35249 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC28.99■■■□□ 2.23
RFC4P35249 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC28.99■■■□□ 2.23
RFC4P35249 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC28.98■■■□□ 2.23
RFC4P35249 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC28.98■■■□□ 2.23
RFC4P35249 VGF-203ENST00000611537 1622 ntTSL 5 BASIC28.98■■■□□ 2.23
RFC4P35249 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC28.98■■■□□ 2.23
RFC4P35249 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC28.98■■■□□ 2.23
RFC4P35249 NME4-202ENST00000382940 766 ntTSL 3 BASIC28.98■■■□□ 2.23
RFC4P35249 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC28.98■■■□□ 2.23
RFC4P35249 SLC47A1P1-202ENST00000449666 945 ntBASIC28.98■■■□□ 2.23
RFC4P35249 NKILA-201ENST00000613231 537 ntTSL 4 BASIC28.98■■■□□ 2.23
RFC4P35249 NME4-211ENST00000620944 1193 ntTSL 2 BASIC28.98■■■□□ 2.23
RFC4P35249 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC28.98■■■□□ 2.23
RFC4P35249 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
RFC4P35249 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC28.97■■■□□ 2.23
RFC4P35249 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
RFC4P35249 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
RFC4P35249 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
RFC4P35249 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
RFC4P35249 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC28.97■■■□□ 2.23
RFC4P35249 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC28.97■■■□□ 2.23
RFC4P35249 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC28.97■■■□□ 2.23
RFC4P35249 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
RFC4P35249 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
RFC4P35249 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC28.97■■■□□ 2.23
RFC4P35249 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
RFC4P35249 SLC6A10P-202ENST00000431994 2058 ntBASIC28.97■■■□□ 2.23
RFC4P35249 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC28.97■■■□□ 2.23
RFC4P35249 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
RFC4P35249 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC28.96■■■□□ 2.23
RFC4P35249 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC28.96■■■□□ 2.23
RFC4P35249 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC28.96■■■□□ 2.23
RFC4P35249 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC28.96■■■□□ 2.23
RFC4P35249 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC28.96■■■□□ 2.23
RFC4P35249 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC28.96■■■□□ 2.23
RFC4P35249 DUX4L2-201ENST00000561772 1275 ntBASIC28.96■■■□□ 2.23
RFC4P35249 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC28.96■■■□□ 2.23
RFC4P35249 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC28.96■■■□□ 2.23
RFC4P35249 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC28.96■■■□□ 2.23
RFC4P35249 AC092437.1-201ENST00000624794 1048 ntBASIC28.96■■■□□ 2.23
RFC4P35249 DUX4L6-201ENST00000626483 1275 ntBASIC28.96■■■□□ 2.23
RFC4P35249 DUX4L1-201ENST00000627662 1275 ntBASIC28.96■■■□□ 2.23
RFC4P35249 DUX4L8-201ENST00000629013 1275 ntBASIC28.96■■■□□ 2.23
RFC4P35249 DUX4L3-201ENST00000630187 1275 ntBASIC28.96■■■□□ 2.23
RFC4P35249 DUX4L7-201ENST00000630678 1275 ntBASIC28.96■■■□□ 2.23
RFC4P35249 DUX4L5-201ENST00000630834 1275 ntBASIC28.96■■■□□ 2.23
RFC4P35249 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC28.96■■■□□ 2.23
RFC4P35249 TSPY26P-201ENST00000476365 1326 ntBASIC28.95■■■□□ 2.23
RFC4P35249 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC28.95■■■□□ 2.23
RFC4P35249 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
RFC4P35249 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC28.95■■■□□ 2.23
RFC4P35249 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
RFC4P35249 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC28.95■■■□□ 2.22
RFC4P35249 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC28.95■■■□□ 2.22
RFC4P35249 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
RFC4P35249 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC28.95■■■□□ 2.22
RFC4P35249 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC28.95■■■□□ 2.22
RFC4P35249 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
RFC4P35249 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC28.94■■■□□ 2.22
RFC4P35249 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC28.94■■■□□ 2.22
RFC4P35249 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC28.94■■■□□ 2.22
RFC4P35249 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC28.94■■■□□ 2.22
RFC4P35249 pRNA.6-201ENST00000610482 90 ntBASIC28.94■■■□□ 2.22
RFC4P35249 pRNA.5-201ENST00000612139 90 ntBASIC28.94■■■□□ 2.22
RFC4P35249 RAB43-208ENST00000615093 783 ntTSL 5 BASIC28.94■■■□□ 2.22
RFC4P35249 pRNA.11-201ENST00000618423 90 ntBASIC28.94■■■□□ 2.22
RFC4P35249 pRNA.13-201ENST00000619112 90 ntBASIC28.94■■■□□ 2.22
RFC4P35249 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC28.94■■■□□ 2.22
RFC4P35249 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC28.93■■■□□ 2.22
RFC4P35249 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC28.93■■■□□ 2.22
RFC4P35249 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
RFC4P35249 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
RFC4P35249 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC28.93■■■□□ 2.22
RFC4P35249 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC28.93■■■□□ 2.22
RFC4P35249 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC28.93■■■□□ 2.22
RFC4P35249 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
RFC4P35249 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
RFC4P35249 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC28.93■■■□□ 2.22
RFC4P35249 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC28.92■■■□□ 2.22
RFC4P35249 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC28.92■■■□□ 2.22
RFC4P35249 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
RFC4P35249 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
RFC4P35249 AC092803.2-201ENST00000564287 1899 ntBASIC28.92■■■□□ 2.22
RFC4P35249 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC28.92■■■□□ 2.22
RFC4P35249 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC28.92■■■□□ 2.22
RFC4P35249 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC28.92■■■□□ 2.22
RFC4P35249 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC28.92■■■□□ 2.22
RFC4P35249 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC28.92■■■□□ 2.22
RFC4P35249 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
RFC4P35249 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
RFC4P35249 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC28.92■■■□□ 2.22
RFC4P35249 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC28.91■■■□□ 2.22
RFC4P35249 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC28.91■■■□□ 2.22
RFC4P35249 MIR6089-201ENST00000616698 64 ntBASIC28.91■■■□□ 2.22
RFC4P35249 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC28.9■■■□□ 2.22
RFC4P35249 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
RFC4P35249 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC28.9■■■□□ 2.22
RFC4P35249 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms