Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
BMP4P12644 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
BMP4P12644 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
BMP4P12644 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
BMP4P12644 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
BMP4P12644 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
BMP4P12644 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
BMP4P12644 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.74■□□□□ 0.91
BMP4P12644 LINC00526-201ENST00000581067 1875 ntBASIC20.74■□□□□ 0.91
BMP4P12644 AC010980.1-201ENST00000587192 1142 ntBASIC20.74■□□□□ 0.91
BMP4P12644 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
BMP4P12644 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.74■□□□□ 0.91
BMP4P12644 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BMP4P12644 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
BMP4P12644 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
BMP4P12644 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
BMP4P12644 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
BMP4P12644 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
BMP4P12644 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
BMP4P12644 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
BMP4P12644 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.73■□□□□ 0.91
BMP4P12644 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BMP4P12644 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BMP4P12644 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BMP4P12644 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.73■□□□□ 0.91
BMP4P12644 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.73■□□□□ 0.91
BMP4P12644 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BMP4P12644 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BMP4P12644 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
BMP4P12644 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.73■□□□□ 0.91
BMP4P12644 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.73■□□□□ 0.91
BMP4P12644 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
BMP4P12644 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
BMP4P12644 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.72■□□□□ 0.91
BMP4P12644 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.72■□□□□ 0.91
BMP4P12644 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BMP4P12644 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.72■□□□□ 0.91
BMP4P12644 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
BMP4P12644 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.72■□□□□ 0.91
BMP4P12644 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
BMP4P12644 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BMP4P12644 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
BMP4P12644 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.71■□□□□ 0.91
BMP4P12644 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
BMP4P12644 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.71■□□□□ 0.91
BMP4P12644 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
BMP4P12644 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BMP4P12644 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.71■□□□□ 0.91
BMP4P12644 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BMP4P12644 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.7■□□□□ 0.9
BMP4P12644 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
BMP4P12644 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.7■□□□□ 0.9
BMP4P12644 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BMP4P12644 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BMP4P12644 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BMP4P12644 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
BMP4P12644 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BMP4P12644 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BMP4P12644 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BMP4P12644 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
BMP4P12644 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
BMP4P12644 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BMP4P12644 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BMP4P12644 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BMP4P12644 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BMP4P12644 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BMP4P12644 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BMP4P12644 AC127496.7-201ENST00000625110 1798 ntBASIC20.68■□□□□ 0.9
BMP4P12644 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
BMP4P12644 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.68■□□□□ 0.9
BMP4P12644 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BMP4P12644 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BMP4P12644 KRT8P33-201ENST00000508125 1423 ntBASIC20.68■□□□□ 0.9
BMP4P12644 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.68■□□□□ 0.9
BMP4P12644 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BMP4P12644 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BMP4P12644 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
BMP4P12644 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.67■□□□□ 0.9
BMP4P12644 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BMP4P12644 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BMP4P12644 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BMP4P12644 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BMP4P12644 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BMP4P12644 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
BMP4P12644 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
BMP4P12644 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
BMP4P12644 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
BMP4P12644 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BMP4P12644 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.67■□□□□ 0.9
BMP4P12644 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BMP4P12644 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BMP4P12644 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
BMP4P12644 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BMP4P12644 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BMP4P12644 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BMP4P12644 AC019171.1-201ENST00000601251 1056 ntBASIC20.66■□□□□ 0.9
BMP4P12644 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BMP4P12644 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BMP4P12644 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BMP4P12644 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms