Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.6■■□□□ 1.05
LAMP1P11279 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.6■■□□□ 1.05
LAMP1P11279 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LAMP1P11279 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
LAMP1P11279 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
LAMP1P11279 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.6■■□□□ 1.05
LAMP1P11279 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
LAMP1P11279 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.6■■□□□ 1.05
LAMP1P11279 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LAMP1P11279 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.59■■□□□ 1.05
LAMP1P11279 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LAMP1P11279 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.59■■□□□ 1.05
LAMP1P11279 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LAMP1P11279 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
LAMP1P11279 KRT18P24-201ENST00000344739 1156 ntBASIC21.59■■□□□ 1.05
LAMP1P11279 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
LAMP1P11279 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.59■■□□□ 1.05
LAMP1P11279 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
LAMP1P11279 ALDH1A3-203ENST00000557963 1670 ntBASIC21.59■■□□□ 1.05
LAMP1P11279 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
LAMP1P11279 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
LAMP1P11279 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.58■■□□□ 1.05
LAMP1P11279 AF131216.4-201ENST00000638924 1588 ntBASIC21.58■■□□□ 1.05
LAMP1P11279 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.58■■□□□ 1.05
LAMP1P11279 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.58■■□□□ 1.05
LAMP1P11279 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.58■■□□□ 1.05
LAMP1P11279 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.58■■□□□ 1.05
LAMP1P11279 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.58■■□□□ 1.05
LAMP1P11279 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
LAMP1P11279 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
LAMP1P11279 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
LAMP1P11279 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
LAMP1P11279 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.57■■□□□ 1.04
LAMP1P11279 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LAMP1P11279 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LAMP1P11279 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.57■■□□□ 1.04
LAMP1P11279 MIR4281-201ENST00000580852 62 ntBASIC21.57■■□□□ 1.04
LAMP1P11279 THA1P-201ENST00000590384 1145 ntBASIC21.57■■□□□ 1.04
LAMP1P11279 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LAMP1P11279 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
LAMP1P11279 AC092068.2-201ENST00000590491 1708 ntBASIC21.57■■□□□ 1.04
LAMP1P11279 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.57■■□□□ 1.04
LAMP1P11279 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LAMP1P11279 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.56■■□□□ 1.04
LAMP1P11279 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LAMP1P11279 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.56■■□□□ 1.04
LAMP1P11279 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
LAMP1P11279 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LAMP1P11279 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.56■■□□□ 1.04
LAMP1P11279 AC012354.3-201ENST00000623734 483 ntBASIC21.56■■□□□ 1.04
LAMP1P11279 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.56■■□□□ 1.04
LAMP1P11279 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LAMP1P11279 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LAMP1P11279 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LAMP1P11279 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.55■■□□□ 1.04
LAMP1P11279 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LAMP1P11279 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LAMP1P11279 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
LAMP1P11279 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
LAMP1P11279 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
LAMP1P11279 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LAMP1P11279 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.55■■□□□ 1.04
LAMP1P11279 AL033527.3-201ENST00000566366 1196 ntBASIC21.55■■□□□ 1.04
LAMP1P11279 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LAMP1P11279 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
LAMP1P11279 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LAMP1P11279 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LAMP1P11279 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LAMP1P11279 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LAMP1P11279 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LAMP1P11279 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
LAMP1P11279 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LAMP1P11279 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LAMP1P11279 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.54■■□□□ 1.04
LAMP1P11279 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.54■■□□□ 1.04
LAMP1P11279 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.54■■□□□ 1.04
LAMP1P11279 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
LAMP1P11279 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.54■■□□□ 1.04
LAMP1P11279 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
LAMP1P11279 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
LAMP1P11279 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
LAMP1P11279 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LAMP1P11279 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
LAMP1P11279 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LAMP1P11279 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.53■■□□□ 1.04
LAMP1P11279 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LAMP1P11279 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
LAMP1P11279 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LAMP1P11279 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
LAMP1P11279 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.52■■□□□ 1.04
LAMP1P11279 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LAMP1P11279 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LAMP1P11279 DUSP8P3-201ENST00000399571 1760 ntBASIC21.52■■□□□ 1.04
LAMP1P11279 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LAMP1P11279 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.52■■□□□ 1.04
LAMP1P11279 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.52■■□□□ 1.04
LAMP1P11279 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
LAMP1P11279 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LAMP1P11279 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LAMP1P11279 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms