Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD28P10747 HYI-206ENST00000372434 1025 ntTSL 5 BASIC17.79■□□□□ 0.44
CD28P10747 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD28P10747 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.79■□□□□ 0.44
CD28P10747 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.79■□□□□ 0.44
CD28P10747 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.79■□□□□ 0.44
CD28P10747 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD28P10747 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD28P10747 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC17.79■□□□□ 0.44
CD28P10747 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CD28P10747 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CD28P10747 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD28P10747 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CD28P10747 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD28P10747 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.78■□□□□ 0.44
CD28P10747 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.78■□□□□ 0.44
CD28P10747 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CD28P10747 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CD28P10747 AC099791.2-201ENST00000605725 427 ntBASIC17.78■□□□□ 0.44
CD28P10747 AC092171.4-201ENST00000609130 632 ntBASIC17.78■□□□□ 0.44
CD28P10747 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC17.78■□□□□ 0.44
CD28P10747 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD28P10747 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CD28P10747 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD28P10747 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD28P10747 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CD28P10747 AC009102.2-201ENST00000606772 1639 ntBASIC17.77■□□□□ 0.44
CD28P10747 AF213884.3-201ENST00000563833 479 ntBASIC17.77■□□□□ 0.44
CD28P10747 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CD28P10747 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CD28P10747 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CD28P10747 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC17.76■□□□□ 0.43
CD28P10747 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CD28P10747 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CD28P10747 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CD28P10747 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD28P10747 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CD28P10747 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC17.76■□□□□ 0.43
CD28P10747 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CD28P10747 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CD28P10747 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.76■□□□□ 0.43
CD28P10747 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CD28P10747 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.76■□□□□ 0.43
CD28P10747 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC17.76■□□□□ 0.43
CD28P10747 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD28P10747 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD28P10747 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.76■□□□□ 0.43
CD28P10747 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD28P10747 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.76■□□□□ 0.43
CD28P10747 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD28P10747 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC17.75■□□□□ 0.43
CD28P10747 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC17.75■□□□□ 0.43
CD28P10747 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CD28P10747 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CD28P10747 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
CD28P10747 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC17.75■□□□□ 0.43
CD28P10747 SERBP1P1-201ENST00000396021 1160 ntBASIC17.75■□□□□ 0.43
CD28P10747 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.75■□□□□ 0.43
CD28P10747 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC17.75■□□□□ 0.43
CD28P10747 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CD28P10747 MIR4767-201ENST00000582827 78 ntBASIC17.75■□□□□ 0.43
CD28P10747 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.75■□□□□ 0.43
CD28P10747 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.75■□□□□ 0.43
CD28P10747 AL136967.2-201ENST00000623968 743 ntBASIC17.75■□□□□ 0.43
CD28P10747 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC17.75■□□□□ 0.43
CD28P10747 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CD28P10747 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CD28P10747 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CD28P10747 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD28P10747 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD28P10747 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD28P10747 HLA-L-211ENST00000482052 1765 ntBASIC17.74■□□□□ 0.43
CD28P10747 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC17.74■□□□□ 0.43
CD28P10747 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CD28P10747 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD28P10747 PTMA-205ENST00000410064 814 ntTSL 2 BASIC17.74■□□□□ 0.43
CD28P10747 AC105265.2-201ENST00000467189 838 ntBASIC17.74■□□□□ 0.43
CD28P10747 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD28P10747 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CD28P10747 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC17.74■□□□□ 0.43
CD28P10747 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD28P10747 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD28P10747 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CD28P10747 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CD28P10747 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD28P10747 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CD28P10747 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CD28P10747 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC17.73■□□□□ 0.43
CD28P10747 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CD28P10747 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.73■□□□□ 0.43
CD28P10747 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.73■□□□□ 0.43
CD28P10747 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CD28P10747 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CD28P10747 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC17.73■□□□□ 0.43
CD28P10747 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CD28P10747 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CD28P10747 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CD28P10747 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CD28P10747 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CD28P10747 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms