Protein–RNA interactions for Protein: P0DPA2

VSIG8, V-set and immunoglobulin domain-containing protein 8, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG8P0DPA2 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VSIG8P0DPA2 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VSIG8P0DPA2 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.49■□□□□ 0.71
VSIG8P0DPA2 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
VSIG8P0DPA2 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
VSIG8P0DPA2 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
VSIG8P0DPA2 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
VSIG8P0DPA2 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
VSIG8P0DPA2 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.49■□□□□ 0.71
VSIG8P0DPA2 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.49■□□□□ 0.71
VSIG8P0DPA2 AL592293.1-201ENST00000502889 1188 ntBASIC19.49■□□□□ 0.71
VSIG8P0DPA2 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
VSIG8P0DPA2 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
VSIG8P0DPA2 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
VSIG8P0DPA2 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VSIG8P0DPA2 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
VSIG8P0DPA2 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
VSIG8P0DPA2 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
VSIG8P0DPA2 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
VSIG8P0DPA2 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
VSIG8P0DPA2 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.48■□□□□ 0.71
VSIG8P0DPA2 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.48■□□□□ 0.71
VSIG8P0DPA2 EP400NL-214ENST00000641289 2402 ntBASIC19.48■□□□□ 0.71
VSIG8P0DPA2 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
VSIG8P0DPA2 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.48■□□□□ 0.71
VSIG8P0DPA2 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
VSIG8P0DPA2 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VSIG8P0DPA2 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
VSIG8P0DPA2 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
VSIG8P0DPA2 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
VSIG8P0DPA2 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VSIG8P0DPA2 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
VSIG8P0DPA2 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
VSIG8P0DPA2 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VSIG8P0DPA2 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
VSIG8P0DPA2 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
VSIG8P0DPA2 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.47■□□□□ 0.71
VSIG8P0DPA2 RNF126P1-201ENST00000567452 1320 ntBASIC19.47■□□□□ 0.71
VSIG8P0DPA2 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
VSIG8P0DPA2 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VSIG8P0DPA2 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.47■□□□□ 0.71
VSIG8P0DPA2 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
VSIG8P0DPA2 CLDN5-201ENST00000403084 2357 ntBASIC19.47■□□□□ 0.71
VSIG8P0DPA2 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VSIG8P0DPA2 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.46■□□□□ 0.71
VSIG8P0DPA2 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VSIG8P0DPA2 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
VSIG8P0DPA2 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VSIG8P0DPA2 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.46■□□□□ 0.71
VSIG8P0DPA2 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VSIG8P0DPA2 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.46■□□□□ 0.71
VSIG8P0DPA2 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
VSIG8P0DPA2 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.46■□□□□ 0.71
VSIG8P0DPA2 AL022069.1-201ENST00000568025 1636 ntBASIC19.46■□□□□ 0.71
VSIG8P0DPA2 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VSIG8P0DPA2 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
VSIG8P0DPA2 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VSIG8P0DPA2 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VSIG8P0DPA2 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VSIG8P0DPA2 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
VSIG8P0DPA2 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
VSIG8P0DPA2 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VSIG8P0DPA2 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
VSIG8P0DPA2 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VSIG8P0DPA2 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.45■□□□□ 0.7
VSIG8P0DPA2 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
VSIG8P0DPA2 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
VSIG8P0DPA2 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
VSIG8P0DPA2 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VSIG8P0DPA2 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VSIG8P0DPA2 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
VSIG8P0DPA2 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
VSIG8P0DPA2 ABHD17AP5-201ENST00000580133 923 ntBASIC19.44■□□□□ 0.7
VSIG8P0DPA2 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VSIG8P0DPA2 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
VSIG8P0DPA2 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
VSIG8P0DPA2 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VSIG8P0DPA2 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.44■□□□□ 0.7
VSIG8P0DPA2 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.44■□□□□ 0.7
VSIG8P0DPA2 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VSIG8P0DPA2 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VSIG8P0DPA2 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VSIG8P0DPA2 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VSIG8P0DPA2 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.43■□□□□ 0.7
VSIG8P0DPA2 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.43■□□□□ 0.7
VSIG8P0DPA2 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.43■□□□□ 0.7
VSIG8P0DPA2 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.43■□□□□ 0.7
VSIG8P0DPA2 MIR6765-201ENST00000614092 87 ntBASIC19.43■□□□□ 0.7
VSIG8P0DPA2 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
VSIG8P0DPA2 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
VSIG8P0DPA2 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.43■□□□□ 0.7
VSIG8P0DPA2 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.42■□□□□ 0.7
VSIG8P0DPA2 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VSIG8P0DPA2 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
VSIG8P0DPA2 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.42■□□□□ 0.7
VSIG8P0DPA2 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VSIG8P0DPA2 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
VSIG8P0DPA2 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.42■□□□□ 0.7
VSIG8P0DPA2 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VSIG8P0DPA2 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms