Protein–RNA interactions for Protein: P0C0S8

HIST1H2AG, Histone H2A type 1, humanhuman

Predicted RBP Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AGP0C0S8 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
HIST1H2AGP0C0S8 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
HIST1H2AGP0C0S8 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.28■■□□□ 1.16
HIST1H2AGP0C0S8 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
HIST1H2AGP0C0S8 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
HIST1H2AGP0C0S8 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
HIST1H2AGP0C0S8 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
HIST1H2AGP0C0S8 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC22.27■■□□□ 1.16
HIST1H2AGP0C0S8 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.27■■□□□ 1.16
HIST1H2AGP0C0S8 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
HIST1H2AGP0C0S8 RNF146-205ENST00000477776 762 ntTSL 3 BASIC22.27■■□□□ 1.16
HIST1H2AGP0C0S8 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
HIST1H2AGP0C0S8 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.27■■□□□ 1.16
HIST1H2AGP0C0S8 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
HIST1H2AGP0C0S8 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.27■■□□□ 1.16
HIST1H2AGP0C0S8 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
HIST1H2AGP0C0S8 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.27■■□□□ 1.15
HIST1H2AGP0C0S8 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
HIST1H2AGP0C0S8 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
HIST1H2AGP0C0S8 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
HIST1H2AGP0C0S8 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
HIST1H2AGP0C0S8 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
HIST1H2AGP0C0S8 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC22.26■■□□□ 1.15
HIST1H2AGP0C0S8 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
HIST1H2AGP0C0S8 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
HIST1H2AGP0C0S8 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HIST1H2AGP0C0S8 EI24-204ENST00000527235 1625 ntTSL 5 BASIC22.25■■□□□ 1.15
HIST1H2AGP0C0S8 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
HIST1H2AGP0C0S8 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HIST1H2AGP0C0S8 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC22.25■■□□□ 1.15
HIST1H2AGP0C0S8 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.25■■□□□ 1.15
HIST1H2AGP0C0S8 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
HIST1H2AGP0C0S8 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
HIST1H2AGP0C0S8 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HIST1H2AGP0C0S8 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
HIST1H2AGP0C0S8 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HIST1H2AGP0C0S8 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HIST1H2AGP0C0S8 AC021242.3-201ENST00000607598 1377 ntBASIC22.25■■□□□ 1.15
HIST1H2AGP0C0S8 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.24■■□□□ 1.15
HIST1H2AGP0C0S8 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
HIST1H2AGP0C0S8 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
HIST1H2AGP0C0S8 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.24■■□□□ 1.15
HIST1H2AGP0C0S8 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC22.24■■□□□ 1.15
HIST1H2AGP0C0S8 KRT125P-201ENST00000546827 989 ntBASIC22.24■■□□□ 1.15
HIST1H2AGP0C0S8 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
HIST1H2AGP0C0S8 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
HIST1H2AGP0C0S8 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
HIST1H2AGP0C0S8 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
HIST1H2AGP0C0S8 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
HIST1H2AGP0C0S8 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
HIST1H2AGP0C0S8 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.23■■□□□ 1.15
HIST1H2AGP0C0S8 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC22.23■■□□□ 1.15
HIST1H2AGP0C0S8 Z92544.1-202ENST00000571933 1220 ntBASIC22.23■■□□□ 1.15
HIST1H2AGP0C0S8 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
HIST1H2AGP0C0S8 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
HIST1H2AGP0C0S8 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC22.23■■□□□ 1.15
HIST1H2AGP0C0S8 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
HIST1H2AGP0C0S8 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
HIST1H2AGP0C0S8 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HIST1H2AGP0C0S8 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
HIST1H2AGP0C0S8 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
HIST1H2AGP0C0S8 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
HIST1H2AGP0C0S8 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
HIST1H2AGP0C0S8 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
HIST1H2AGP0C0S8 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC22.22■■□□□ 1.15
HIST1H2AGP0C0S8 SNX5-217ENST00000606557 1087 ntBASIC22.22■■□□□ 1.15
HIST1H2AGP0C0S8 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
HIST1H2AGP0C0S8 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
HIST1H2AGP0C0S8 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
HIST1H2AGP0C0S8 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
HIST1H2AGP0C0S8 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.21■■□□□ 1.15
HIST1H2AGP0C0S8 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC22.21■■□□□ 1.15
HIST1H2AGP0C0S8 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC22.21■■□□□ 1.15
HIST1H2AGP0C0S8 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
HIST1H2AGP0C0S8 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
HIST1H2AGP0C0S8 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
HIST1H2AGP0C0S8 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
HIST1H2AGP0C0S8 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
HIST1H2AGP0C0S8 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
HIST1H2AGP0C0S8 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.2■■□□□ 1.14
HIST1H2AGP0C0S8 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
HIST1H2AGP0C0S8 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC22.2■■□□□ 1.14
HIST1H2AGP0C0S8 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22.2■■□□□ 1.14
HIST1H2AGP0C0S8 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
HIST1H2AGP0C0S8 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
HIST1H2AGP0C0S8 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
HIST1H2AGP0C0S8 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.19■■□□□ 1.14
HIST1H2AGP0C0S8 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
HIST1H2AGP0C0S8 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
HIST1H2AGP0C0S8 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
HIST1H2AGP0C0S8 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC22.19■■□□□ 1.14
HIST1H2AGP0C0S8 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
HIST1H2AGP0C0S8 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
HIST1H2AGP0C0S8 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.19■■□□□ 1.14
HIST1H2AGP0C0S8 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.19■■□□□ 1.14
HIST1H2AGP0C0S8 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
HIST1H2AGP0C0S8 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC22.18■■□□□ 1.14
HIST1H2AGP0C0S8 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
HIST1H2AGP0C0S8 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
HIST1H2AGP0C0S8 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms