Protein–RNA interactions for Protein: P08294

SOD3, Extracellular superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 240 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD3P08294 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SOD3P08294 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SOD3P08294 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SOD3P08294 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SOD3P08294 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SOD3P08294 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SOD3P08294 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SOD3P08294 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SOD3P08294 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SOD3P08294 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SOD3P08294 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SOD3P08294 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.61■□□□□ 0.73
SOD3P08294 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.61■□□□□ 0.73
SOD3P08294 SUDS3P1-201ENST00000505831 966 ntBASIC19.61■□□□□ 0.73
SOD3P08294 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SOD3P08294 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SOD3P08294 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.61■□□□□ 0.73
SOD3P08294 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SOD3P08294 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.6■□□□□ 0.73
SOD3P08294 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SOD3P08294 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.6■□□□□ 0.73
SOD3P08294 MIR6089-201ENST00000616698 64 ntBASIC19.6■□□□□ 0.73
SOD3P08294 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.6■□□□□ 0.73
SOD3P08294 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SOD3P08294 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SOD3P08294 AC091060.1-201ENST00000623524 1766 ntBASIC19.6■□□□□ 0.73
SOD3P08294 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SOD3P08294 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SOD3P08294 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SOD3P08294 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SOD3P08294 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SOD3P08294 EDA-201ENST00000338901 1233 ntBASIC19.59■□□□□ 0.73
SOD3P08294 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SOD3P08294 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SOD3P08294 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.59■□□□□ 0.73
SOD3P08294 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
SOD3P08294 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SOD3P08294 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SOD3P08294 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SOD3P08294 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SOD3P08294 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SOD3P08294 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SOD3P08294 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.58■□□□□ 0.72
SOD3P08294 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.58■□□□□ 0.72
SOD3P08294 AL355001.2-201ENST00000620617 1191 ntBASIC19.58■□□□□ 0.72
SOD3P08294 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SOD3P08294 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SOD3P08294 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SOD3P08294 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.57■□□□□ 0.72
SOD3P08294 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SOD3P08294 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SOD3P08294 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SOD3P08294 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SOD3P08294 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SOD3P08294 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
SOD3P08294 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.57■□□□□ 0.72
SOD3P08294 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SOD3P08294 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.57■□□□□ 0.72
SOD3P08294 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
SOD3P08294 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
SOD3P08294 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SOD3P08294 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SOD3P08294 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.56■□□□□ 0.72
SOD3P08294 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SOD3P08294 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SOD3P08294 AL022069.1-201ENST00000568025 1636 ntBASIC19.56■□□□□ 0.72
SOD3P08294 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SOD3P08294 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SOD3P08294 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SOD3P08294 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SOD3P08294 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.56■□□□□ 0.72
SOD3P08294 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.56■□□□□ 0.72
SOD3P08294 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.56■□□□□ 0.72
SOD3P08294 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.56■□□□□ 0.72
SOD3P08294 DUX4L19-201ENST00000557448 1267 ntBASIC19.56■□□□□ 0.72
SOD3P08294 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
SOD3P08294 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
SOD3P08294 AC145676.1-201ENST00000514988 2004 ntBASIC19.56■□□□□ 0.72
SOD3P08294 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SOD3P08294 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SOD3P08294 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.55■□□□□ 0.72
SOD3P08294 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SOD3P08294 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SOD3P08294 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.55■□□□□ 0.72
SOD3P08294 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SOD3P08294 SYT6-210ENST00000641643 1587 ntBASIC19.55■□□□□ 0.72
SOD3P08294 AC133561.1-201ENST00000568600 2415 ntBASIC19.55■□□□□ 0.72
SOD3P08294 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.55■□□□□ 0.72
SOD3P08294 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SOD3P08294 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.54■□□□□ 0.72
SOD3P08294 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SOD3P08294 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.54■□□□□ 0.72
SOD3P08294 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SOD3P08294 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.54■□□□□ 0.72
SOD3P08294 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.54■□□□□ 0.72
SOD3P08294 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SOD3P08294 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
SOD3P08294 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SOD3P08294 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.54■□□□□ 0.72
SOD3P08294 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms