Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC27.57■■■□□ 2
CHGBP05060 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC27.57■■■□□ 2
CHGBP05060 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
CHGBP05060 TRIR-202ENST00000588213 841 ntTSL 3 BASIC27.57■■■□□ 2
CHGBP05060 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
CHGBP05060 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
CHGBP05060 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC27.56■■■□□ 2
CHGBP05060 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC27.56■■■□□ 2
CHGBP05060 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC27.56■■■□□ 2
CHGBP05060 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC27.56■■■□□ 2
CHGBP05060 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC27.56■■■□□ 2
CHGBP05060 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
CHGBP05060 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC27.56■■■□□ 2
CHGBP05060 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC27.55■■■□□ 2
CHGBP05060 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC27.55■■■□□ 2
CHGBP05060 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC27.55■■■□□ 2
CHGBP05060 TFPT-201ENST00000391757 774 ntTSL 5 BASIC27.55■■■□□ 2
CHGBP05060 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
CHGBP05060 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC27.55■■■□□ 2
CHGBP05060 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
CHGBP05060 REST-206ENST00000612429 1376 ntTSL 5 BASIC27.55■■■□□ 2
CHGBP05060 REST-207ENST00000616975 1370 ntTSL 5 BASIC27.55■■■□□ 2
CHGBP05060 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC27.55■■■□□ 2
CHGBP05060 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
CHGBP05060 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC27.54■■■□□ 2
CHGBP05060 ALDH1A3-203ENST00000557963 1670 ntBASIC27.54■■■□□ 2
CHGBP05060 USF2-207ENST00000595068 1612 ntTSL 5 BASIC27.54■■■□□ 2
CHGBP05060 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC27.54■■■□□ 2
CHGBP05060 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CHGBP05060 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC27.53■■■□□ 2
CHGBP05060 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC27.53■■■□□ 2
CHGBP05060 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC27.53■■■□□ 2
CHGBP05060 MIR3621-201ENST00000580529 85 ntBASIC27.53■■■□□ 2
CHGBP05060 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC27.53■■■□□ 2
CHGBP05060 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CHGBP05060 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC27.53■■■□□ 2
CHGBP05060 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC27.52■■■□□ 2
CHGBP05060 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC27.52■■■□□ 2
CHGBP05060 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CHGBP05060 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC27.52■■■□□ 2
CHGBP05060 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC27.52■■■□□ 2
CHGBP05060 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CHGBP05060 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CHGBP05060 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC27.51■■□□□ 1.99
CHGBP05060 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
CHGBP05060 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC27.51■■□□□ 1.99
CHGBP05060 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
CHGBP05060 MIR4466-201ENST00000606121 54 ntBASIC27.51■■□□□ 1.99
CHGBP05060 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC27.51■■□□□ 1.99
CHGBP05060 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
CHGBP05060 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC27.5■■□□□ 1.99
CHGBP05060 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC27.5■■□□□ 1.99
CHGBP05060 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC27.5■■□□□ 1.99
CHGBP05060 AC131281.2-201ENST00000520478 145 ntBASIC27.5■■□□□ 1.99
CHGBP05060 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC27.5■■□□□ 1.99
CHGBP05060 AL512631.2-201ENST00000604634 923 ntBASIC27.5■■□□□ 1.99
CHGBP05060 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC27.5■■□□□ 1.99
CHGBP05060 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
CHGBP05060 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
CHGBP05060 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
CHGBP05060 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
CHGBP05060 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
CHGBP05060 AC141586.4-201ENST00000624558 1573 ntBASIC27.49■■□□□ 1.99
CHGBP05060 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC27.49■■□□□ 1.99
CHGBP05060 SRR-208ENST00000576848 588 ntTSL 4 BASIC27.49■■□□□ 1.99
CHGBP05060 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
CHGBP05060 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
CHGBP05060 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC27.48■■□□□ 1.99
CHGBP05060 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
CHGBP05060 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC27.48■■□□□ 1.99
CHGBP05060 AK3-203ENST00000447596 705 ntTSL 2 BASIC27.48■■□□□ 1.99
CHGBP05060 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC27.48■■□□□ 1.99
CHGBP05060 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
CHGBP05060 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC27.48■■□□□ 1.99
CHGBP05060 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CHGBP05060 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC27.47■■□□□ 1.99
CHGBP05060 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CHGBP05060 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CHGBP05060 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
CHGBP05060 RPP21-222ENST00000433076 577 ntTSL 2 BASIC27.47■■□□□ 1.99
CHGBP05060 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC27.47■■□□□ 1.99
CHGBP05060 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
CHGBP05060 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CHGBP05060 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
CHGBP05060 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC27.47■■□□□ 1.99
CHGBP05060 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC27.47■■□□□ 1.99
CHGBP05060 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC27.47■■□□□ 1.99
CHGBP05060 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CHGBP05060 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC27.47■■□□□ 1.99
CHGBP05060 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC27.46■■□□□ 1.99
CHGBP05060 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
CHGBP05060 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
CHGBP05060 AL161729.1-201ENST00000604104 1402 ntBASIC27.46■■□□□ 1.99
CHGBP05060 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
CHGBP05060 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC27.46■■□□□ 1.99
CHGBP05060 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
CHGBP05060 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC27.46■■□□□ 1.99
CHGBP05060 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC27.45■■□□□ 1.99
CHGBP05060 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC27.45■■□□□ 1.98
CHGBP05060 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC27.45■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms