Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOBP04114 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC14.49□□□□□ -0.09
APOBP04114 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC14.49□□□□□ -0.09
APOBP04114 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC14.49□□□□□ -0.09
APOBP04114 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
APOBP04114 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOBP04114 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOBP04114 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOBP04114 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
APOBP04114 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC14.49□□□□□ -0.09
APOBP04114 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOBP04114 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
APOBP04114 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
APOBP04114 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOBP04114 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOBP04114 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
APOBP04114 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOBP04114 CROCCP5-201ENST00000436658 830 ntBASIC14.48□□□□□ -0.09
APOBP04114 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC14.48□□□□□ -0.09
APOBP04114 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC14.48□□□□□ -0.09
APOBP04114 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOBP04114 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOBP04114 AC012414.1-201ENST00000556676 535 ntBASIC14.48□□□□□ -0.09
APOBP04114 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC14.48□□□□□ -0.09
APOBP04114 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
APOBP04114 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC14.48□□□□□ -0.09
APOBP04114 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC14.48□□□□□ -0.09
APOBP04114 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC14.48□□□□□ -0.09
APOBP04114 GXYLT1P5-201ENST00000614548 1189 ntBASIC14.48□□□□□ -0.09
APOBP04114 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
APOBP04114 GTSE1-AS1-202ENST00000623117 1518 ntBASIC14.47□□□□□ -0.09
APOBP04114 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOBP04114 CCDC92B-201ENST00000575506 885 ntBASIC14.47□□□□□ -0.09
APOBP04114 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
APOBP04114 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOBP04114 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOBP04114 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC14.47□□□□□ -0.09
APOBP04114 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC14.47□□□□□ -0.09
APOBP04114 pRNA.6-201ENST00000610482 90 ntBASIC14.47□□□□□ -0.09
APOBP04114 pRNA.5-201ENST00000612139 90 ntBASIC14.47□□□□□ -0.09
APOBP04114 pRNA.11-201ENST00000618423 90 ntBASIC14.47□□□□□ -0.09
APOBP04114 pRNA.13-201ENST00000619112 90 ntBASIC14.47□□□□□ -0.09
APOBP04114 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOBP04114 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC14.46□□□□□ -0.09
APOBP04114 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC14.46□□□□□ -0.09
APOBP04114 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC14.46□□□□□ -0.09
APOBP04114 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC14.46□□□□□ -0.09
APOBP04114 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
APOBP04114 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
APOBP04114 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
APOBP04114 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
APOBP04114 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC14.46□□□□□ -0.1
APOBP04114 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
APOBP04114 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC14.45□□□□□ -0.1
APOBP04114 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC14.45□□□□□ -0.1
APOBP04114 AC104771.1-201ENST00000603335 964 ntBASIC14.45□□□□□ -0.1
APOBP04114 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC14.45□□□□□ -0.1
APOBP04114 GUSBP6-202ENST00000438529 1198 ntBASIC14.45□□□□□ -0.1
APOBP04114 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC14.45□□□□□ -0.1
APOBP04114 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
APOBP04114 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
APOBP04114 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
APOBP04114 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
APOBP04114 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC14.45□□□□□ -0.1
APOBP04114 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
APOBP04114 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC14.45□□□□□ -0.1
APOBP04114 HES6-206ENST00000409574 738 ntTSL 2 BASIC14.45□□□□□ -0.1
APOBP04114 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC14.45□□□□□ -0.1
APOBP04114 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
APOBP04114 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC14.45□□□□□ -0.1
APOBP04114 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
APOBP04114 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC14.44□□□□□ -0.1
APOBP04114 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC14.44□□□□□ -0.1
APOBP04114 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
APOBP04114 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
APOBP04114 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
APOBP04114 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC14.44□□□□□ -0.1
APOBP04114 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
APOBP04114 MIR6084-201ENST00000622012 110 ntBASIC14.44□□□□□ -0.1
APOBP04114 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC14.44□□□□□ -0.1
APOBP04114 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
APOBP04114 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
APOBP04114 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
APOBP04114 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC14.44□□□□□ -0.1
APOBP04114 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
APOBP04114 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
APOBP04114 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
APOBP04114 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC14.44□□□□□ -0.1
APOBP04114 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOBP04114 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
APOBP04114 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC14.43□□□□□ -0.1
APOBP04114 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
APOBP04114 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOBP04114 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC14.43□□□□□ -0.1
APOBP04114 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC14.43□□□□□ -0.1
APOBP04114 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC14.43□□□□□ -0.1
APOBP04114 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC14.43□□□□□ -0.1
APOBP04114 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
APOBP04114 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOBP04114 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms