Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
PDGFAP04085 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDGFAP04085 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.21■□□□□ 0.99
PDGFAP04085 AC087623.3-201ENST00000607047 1098 ntBASIC21.21■□□□□ 0.99
PDGFAP04085 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.21■□□□□ 0.99
PDGFAP04085 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDGFAP04085 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDGFAP04085 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
PDGFAP04085 AC133561.1-201ENST00000568600 2415 ntBASIC21.2■□□□□ 0.99
PDGFAP04085 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDGFAP04085 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
PDGFAP04085 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.2■□□□□ 0.98
PDGFAP04085 SERBP1P1-201ENST00000396021 1160 ntBASIC21.2■□□□□ 0.98
PDGFAP04085 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PDGFAP04085 AC097381.1-201ENST00000429019 1296 ntBASIC21.2■□□□□ 0.98
PDGFAP04085 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.2■□□□□ 0.98
PDGFAP04085 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.2■□□□□ 0.98
PDGFAP04085 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDGFAP04085 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.2■□□□□ 0.98
PDGFAP04085 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PDGFAP04085 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDGFAP04085 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDGFAP04085 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDGFAP04085 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDGFAP04085 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.19■□□□□ 0.98
PDGFAP04085 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDGFAP04085 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.19■□□□□ 0.98
PDGFAP04085 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.19■□□□□ 0.98
PDGFAP04085 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PDGFAP04085 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PDGFAP04085 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.19■□□□□ 0.98
PDGFAP04085 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.19■□□□□ 0.98
PDGFAP04085 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDGFAP04085 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDGFAP04085 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.19■□□□□ 0.98
PDGFAP04085 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDGFAP04085 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDGFAP04085 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDGFAP04085 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDGFAP04085 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PDGFAP04085 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDGFAP04085 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PDGFAP04085 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
PDGFAP04085 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
PDGFAP04085 CA15P2-201ENST00000611168 834 ntBASIC21.18■□□□□ 0.98
PDGFAP04085 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PDGFAP04085 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.18■□□□□ 0.98
PDGFAP04085 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.18■□□□□ 0.98
PDGFAP04085 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
PDGFAP04085 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDGFAP04085 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PDGFAP04085 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
PDGFAP04085 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.17■□□□□ 0.98
PDGFAP04085 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PDGFAP04085 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PDGFAP04085 LINC00543-201ENST00000567234 1845 ntBASIC21.17■□□□□ 0.98
PDGFAP04085 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.17■□□□□ 0.98
PDGFAP04085 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.17■□□□□ 0.98
PDGFAP04085 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
PDGFAP04085 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDGFAP04085 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDGFAP04085 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDGFAP04085 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDGFAP04085 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDGFAP04085 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDGFAP04085 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
PDGFAP04085 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.16■□□□□ 0.98
PDGFAP04085 AL162430.1-201ENST00000480705 870 ntBASIC21.16■□□□□ 0.98
PDGFAP04085 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PDGFAP04085 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDGFAP04085 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDGFAP04085 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
PDGFAP04085 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDGFAP04085 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDGFAP04085 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.15■□□□□ 0.98
PDGFAP04085 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.15■□□□□ 0.98
PDGFAP04085 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PDGFAP04085 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.15■□□□□ 0.98
PDGFAP04085 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.15■□□□□ 0.98
PDGFAP04085 AC099791.2-201ENST00000605725 427 ntBASIC21.15■□□□□ 0.98
PDGFAP04085 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
PDGFAP04085 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.15■□□□□ 0.98
PDGFAP04085 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDGFAP04085 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PDGFAP04085 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
PDGFAP04085 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PDGFAP04085 RASA4CP-201ENST00000424092 1398 ntBASIC21.14■□□□□ 0.98
PDGFAP04085 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PDGFAP04085 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.14■□□□□ 0.97
PDGFAP04085 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.14■□□□□ 0.97
PDGFAP04085 AC131274.2-201ENST00000580697 1507 ntBASIC21.14■□□□□ 0.97
PDGFAP04085 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PDGFAP04085 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PDGFAP04085 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDGFAP04085 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.13■□□□□ 0.97
PDGFAP04085 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PDGFAP04085 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
PDGFAP04085 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PDGFAP04085 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.13■□□□□ 0.97
PDGFAP04085 AC092171.4-201ENST00000609130 632 ntBASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms