Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.37■■□□□ 1.01
PLOD3O60568 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.37■■□□□ 1.01
PLOD3O60568 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PLOD3O60568 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.37■■□□□ 1.01
PLOD3O60568 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PLOD3O60568 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PLOD3O60568 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PLOD3O60568 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
PLOD3O60568 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.36■■□□□ 1.01
PLOD3O60568 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PLOD3O60568 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.36■■□□□ 1.01
PLOD3O60568 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PLOD3O60568 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PLOD3O60568 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.36■■□□□ 1.01
PLOD3O60568 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
PLOD3O60568 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PLOD3O60568 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.36■■□□□ 1.01
PLOD3O60568 Z92544.1-202ENST00000571933 1220 ntBASIC21.36■■□□□ 1.01
PLOD3O60568 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
PLOD3O60568 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.36■■□□□ 1.01
PLOD3O60568 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.36■■□□□ 1.01
PLOD3O60568 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
PLOD3O60568 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PLOD3O60568 ALDH1A3-203ENST00000557963 1670 ntBASIC21.35■■□□□ 1.01
PLOD3O60568 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.35■■□□□ 1.01
PLOD3O60568 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.35■■□□□ 1.01
PLOD3O60568 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.35■■□□□ 1.01
PLOD3O60568 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.35■■□□□ 1.01
PLOD3O60568 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.35■■□□□ 1.01
PLOD3O60568 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.35■■□□□ 1.01
PLOD3O60568 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PLOD3O60568 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
PLOD3O60568 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PLOD3O60568 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PLOD3O60568 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
PLOD3O60568 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
PLOD3O60568 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
PLOD3O60568 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.34■■□□□ 1.01
PLOD3O60568 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.34■■□□□ 1.01
PLOD3O60568 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.34■■□□□ 1.01
PLOD3O60568 SNX5-217ENST00000606557 1087 ntBASIC21.34■■□□□ 1.01
PLOD3O60568 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.34■■□□□ 1.01
PLOD3O60568 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PLOD3O60568 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PLOD3O60568 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PLOD3O60568 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PLOD3O60568 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PLOD3O60568 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PLOD3O60568 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.34■■□□□ 1.01
PLOD3O60568 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PLOD3O60568 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PLOD3O60568 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PLOD3O60568 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
PLOD3O60568 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PLOD3O60568 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PLOD3O60568 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PLOD3O60568 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.33■■□□□ 1.01
PLOD3O60568 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PLOD3O60568 AL451085.2-201ENST00000605085 799 ntBASIC21.33■■□□□ 1.01
PLOD3O60568 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PLOD3O60568 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
PLOD3O60568 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PLOD3O60568 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.33■■□□□ 1
PLOD3O60568 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
PLOD3O60568 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.32■■□□□ 1
PLOD3O60568 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
PLOD3O60568 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
PLOD3O60568 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
PLOD3O60568 AC009299.2-201ENST00000482477 511 ntBASIC21.32■■□□□ 1
PLOD3O60568 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.32■■□□□ 1
PLOD3O60568 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.32■■□□□ 1
PLOD3O60568 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
PLOD3O60568 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
PLOD3O60568 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
PLOD3O60568 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PLOD3O60568 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PLOD3O60568 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PLOD3O60568 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.31■■□□□ 1
PLOD3O60568 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
PLOD3O60568 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
PLOD3O60568 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
PLOD3O60568 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.3■■□□□ 1
PLOD3O60568 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
PLOD3O60568 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.3■■□□□ 1
PLOD3O60568 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.3■■□□□ 1
PLOD3O60568 KRT125P-201ENST00000546827 989 ntBASIC21.3■■□□□ 1
PLOD3O60568 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.3■■□□□ 1
PLOD3O60568 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
PLOD3O60568 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PLOD3O60568 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.3■■□□□ 1
PLOD3O60568 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
PLOD3O60568 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
PLOD3O60568 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.29■■□□□ 1
PLOD3O60568 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PLOD3O60568 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PLOD3O60568 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.29■■□□□ 1
PLOD3O60568 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
PLOD3O60568 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
PLOD3O60568 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.29■■□□□ 1
PLOD3O60568 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms