Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.4■□□□□ 0.7
SSNA1O43805 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
SSNA1O43805 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SSNA1O43805 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SSNA1O43805 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSNA1O43805 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SSNA1O43805 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSNA1O43805 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.39■□□□□ 0.69
SSNA1O43805 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSNA1O43805 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC19.39■□□□□ 0.69
SSNA1O43805 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SSNA1O43805 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSNA1O43805 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
SSNA1O43805 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSNA1O43805 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SSNA1O43805 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SSNA1O43805 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SSNA1O43805 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.39■□□□□ 0.69
SSNA1O43805 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SSNA1O43805 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSNA1O43805 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSNA1O43805 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSNA1O43805 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SSNA1O43805 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SSNA1O43805 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SSNA1O43805 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSNA1O43805 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.38■□□□□ 0.69
SSNA1O43805 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSNA1O43805 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.38■□□□□ 0.69
SSNA1O43805 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSNA1O43805 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
SSNA1O43805 AC005559.1-201ENST00000589661 871 ntBASIC19.38■□□□□ 0.69
SSNA1O43805 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSNA1O43805 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSNA1O43805 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSNA1O43805 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SSNA1O43805 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.37■□□□□ 0.69
SSNA1O43805 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SSNA1O43805 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.37■□□□□ 0.69
SSNA1O43805 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.37■□□□□ 0.69
SSNA1O43805 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSNA1O43805 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SSNA1O43805 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSNA1O43805 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SSNA1O43805 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SSNA1O43805 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SSNA1O43805 AL359504.2-201ENST00000605506 1601 ntBASIC19.36■□□□□ 0.69
SSNA1O43805 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SSNA1O43805 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSNA1O43805 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.36■□□□□ 0.69
SSNA1O43805 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSNA1O43805 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSNA1O43805 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC19.36■□□□□ 0.69
SSNA1O43805 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSNA1O43805 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SSNA1O43805 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSNA1O43805 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSNA1O43805 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.36■□□□□ 0.69
SSNA1O43805 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.36■□□□□ 0.69
SSNA1O43805 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SSNA1O43805 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSNA1O43805 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
SSNA1O43805 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSNA1O43805 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSNA1O43805 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SSNA1O43805 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.35■□□□□ 0.69
SSNA1O43805 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SSNA1O43805 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.35■□□□□ 0.69
SSNA1O43805 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.34■□□□□ 0.69
SSNA1O43805 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
SSNA1O43805 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.34■□□□□ 0.69
SSNA1O43805 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SSNA1O43805 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC19.34■□□□□ 0.69
SSNA1O43805 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SSNA1O43805 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSNA1O43805 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSNA1O43805 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SSNA1O43805 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.34■□□□□ 0.69
SSNA1O43805 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSNA1O43805 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SSNA1O43805 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSNA1O43805 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSNA1O43805 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
SSNA1O43805 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.33■□□□□ 0.69
SSNA1O43805 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
SSNA1O43805 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SSNA1O43805 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SSNA1O43805 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
SSNA1O43805 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SSNA1O43805 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SSNA1O43805 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SSNA1O43805 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SSNA1O43805 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SSNA1O43805 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.32■□□□□ 0.68
SSNA1O43805 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.32■□□□□ 0.68
SSNA1O43805 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SSNA1O43805 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSNA1O43805 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.32■□□□□ 0.68
SSNA1O43805 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC19.32■□□□□ 0.68
SSNA1O43805 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms