Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.55■□□□□ 0.88
SMAD9O15198 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMAD9O15198 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMAD9O15198 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMAD9O15198 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.55■□□□□ 0.88
SMAD9O15198 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.55■□□□□ 0.88
SMAD9O15198 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SMAD9O15198 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMAD9O15198 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SMAD9O15198 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.54■□□□□ 0.88
SMAD9O15198 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SMAD9O15198 AL161729.1-201ENST00000604104 1402 ntBASIC20.54■□□□□ 0.88
SMAD9O15198 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMAD9O15198 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMAD9O15198 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.54■□□□□ 0.88
SMAD9O15198 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.54■□□□□ 0.88
SMAD9O15198 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.54■□□□□ 0.88
SMAD9O15198 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.54■□□□□ 0.88
SMAD9O15198 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SMAD9O15198 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SMAD9O15198 LINC00543-201ENST00000567234 1845 ntBASIC20.54■□□□□ 0.88
SMAD9O15198 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SMAD9O15198 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SMAD9O15198 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMAD9O15198 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMAD9O15198 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMAD9O15198 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.53■□□□□ 0.88
SMAD9O15198 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMAD9O15198 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.53■□□□□ 0.88
SMAD9O15198 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.53■□□□□ 0.88
SMAD9O15198 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.53■□□□□ 0.88
SMAD9O15198 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.53■□□□□ 0.88
SMAD9O15198 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.53■□□□□ 0.88
SMAD9O15198 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.53■□□□□ 0.88
SMAD9O15198 AC141586.4-201ENST00000624558 1573 ntBASIC20.53■□□□□ 0.88
SMAD9O15198 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.53■□□□□ 0.88
SMAD9O15198 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMAD9O15198 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMAD9O15198 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SMAD9O15198 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SMAD9O15198 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMAD9O15198 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMAD9O15198 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMAD9O15198 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
SMAD9O15198 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMAD9O15198 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.52■□□□□ 0.88
SMAD9O15198 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.52■□□□□ 0.88
SMAD9O15198 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.52■□□□□ 0.88
SMAD9O15198 MTDHP2-201ENST00000601468 714 ntBASIC20.52■□□□□ 0.88
SMAD9O15198 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMAD9O15198 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.52■□□□□ 0.88
SMAD9O15198 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
SMAD9O15198 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.51■□□□□ 0.87
SMAD9O15198 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMAD9O15198 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SMAD9O15198 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMAD9O15198 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.5■□□□□ 0.87
SMAD9O15198 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.5■□□□□ 0.87
SMAD9O15198 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SMAD9O15198 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMAD9O15198 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMAD9O15198 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SMAD9O15198 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMAD9O15198 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMAD9O15198 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMAD9O15198 AC010997.5-201ENST00000609182 354 ntBASIC20.5■□□□□ 0.87
SMAD9O15198 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.5■□□□□ 0.87
SMAD9O15198 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SMAD9O15198 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMAD9O15198 AC133561.1-201ENST00000568600 2415 ntBASIC20.49■□□□□ 0.87
SMAD9O15198 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.49■□□□□ 0.87
SMAD9O15198 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMAD9O15198 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
SMAD9O15198 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SMAD9O15198 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.49■□□□□ 0.87
SMAD9O15198 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.49■□□□□ 0.87
SMAD9O15198 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
SMAD9O15198 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SMAD9O15198 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SMAD9O15198 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMAD9O15198 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SMAD9O15198 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.49■□□□□ 0.87
SMAD9O15198 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SMAD9O15198 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
SMAD9O15198 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SMAD9O15198 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.48■□□□□ 0.87
SMAD9O15198 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
SMAD9O15198 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMAD9O15198 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMAD9O15198 KRT16P3-201ENST00000439127 1283 ntBASIC20.48■□□□□ 0.87
SMAD9O15198 AL356441.2-201ENST00000443009 864 ntBASIC20.48■□□□□ 0.87
SMAD9O15198 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.48■□□□□ 0.87
SMAD9O15198 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.48■□□□□ 0.87
SMAD9O15198 MIR6722-201ENST00000617286 78 ntBASIC20.48■□□□□ 0.87
SMAD9O15198 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SMAD9O15198 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMAD9O15198 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SMAD9O15198 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SMAD9O15198 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.47■□□□□ 0.87
SMAD9O15198 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms