Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC24.4■■□□□ 1.5
TRANK1O15050 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TRANK1O15050 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
TRANK1O15050 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TRANK1O15050 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
TRANK1O15050 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC24.39■■□□□ 1.49
TRANK1O15050 KRT18P14-201ENST00000534205 1250 ntBASIC24.39■■□□□ 1.49
TRANK1O15050 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
TRANK1O15050 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
TRANK1O15050 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TRANK1O15050 BX842568.3-201ENST00000418104 571 ntBASIC24.38■■□□□ 1.49
TRANK1O15050 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
TRANK1O15050 GRAMD4P2-201ENST00000423297 1097 ntBASIC24.38■■□□□ 1.49
TRANK1O15050 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
TRANK1O15050 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC24.38■■□□□ 1.49
TRANK1O15050 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TRANK1O15050 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC24.38■■□□□ 1.49
TRANK1O15050 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
TRANK1O15050 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TRANK1O15050 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
TRANK1O15050 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TRANK1O15050 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC24.37■■□□□ 1.49
TRANK1O15050 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC24.37■■□□□ 1.49
TRANK1O15050 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC24.37■■□□□ 1.49
TRANK1O15050 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC24.37■■□□□ 1.49
TRANK1O15050 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC24.37■■□□□ 1.49
TRANK1O15050 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
TRANK1O15050 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC24.37■■□□□ 1.49
TRANK1O15050 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
TRANK1O15050 NME4-202ENST00000382940 766 ntTSL 3 BASIC24.36■■□□□ 1.49
TRANK1O15050 NME4-211ENST00000620944 1193 ntTSL 2 BASIC24.36■■□□□ 1.49
TRANK1O15050 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TRANK1O15050 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC24.36■■□□□ 1.49
TRANK1O15050 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
TRANK1O15050 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC24.35■■□□□ 1.49
TRANK1O15050 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC24.35■■□□□ 1.49
TRANK1O15050 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC24.35■■□□□ 1.49
TRANK1O15050 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TRANK1O15050 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
TRANK1O15050 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC24.34■■□□□ 1.49
TRANK1O15050 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
TRANK1O15050 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC24.34■■□□□ 1.49
TRANK1O15050 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC24.34■■□□□ 1.49
TRANK1O15050 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC24.34■■□□□ 1.49
TRANK1O15050 GTSE1-AS1-202ENST00000623117 1518 ntBASIC24.33■■□□□ 1.49
TRANK1O15050 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
TRANK1O15050 AICDA-202ENST00000537228 667 ntTSL 5 BASIC24.33■■□□□ 1.49
TRANK1O15050 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC24.33■■□□□ 1.49
TRANK1O15050 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
TRANK1O15050 NKILA-201ENST00000613231 537 ntTSL 4 BASIC24.33■■□□□ 1.48
TRANK1O15050 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.48
TRANK1O15050 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
TRANK1O15050 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC24.32■■□□□ 1.48
TRANK1O15050 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC24.32■■□□□ 1.48
TRANK1O15050 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC24.32■■□□□ 1.48
TRANK1O15050 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC24.32■■□□□ 1.48
TRANK1O15050 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC24.32■■□□□ 1.48
TRANK1O15050 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
TRANK1O15050 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
TRANK1O15050 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
TRANK1O15050 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TRANK1O15050 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC24.31■■□□□ 1.48
TRANK1O15050 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC24.31■■□□□ 1.48
TRANK1O15050 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
TRANK1O15050 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
TRANK1O15050 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
TRANK1O15050 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
TRANK1O15050 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TRANK1O15050 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
TRANK1O15050 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC24.3■■□□□ 1.48
TRANK1O15050 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC24.3■■□□□ 1.48
TRANK1O15050 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TRANK1O15050 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
TRANK1O15050 KRT18P61-201ENST00000585825 1298 ntBASIC24.3■■□□□ 1.48
TRANK1O15050 VGF-203ENST00000611537 1622 ntTSL 5 BASIC24.3■■□□□ 1.48
TRANK1O15050 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TRANK1O15050 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC24.29■■□□□ 1.48
TRANK1O15050 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
TRANK1O15050 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TRANK1O15050 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
TRANK1O15050 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC24.29■■□□□ 1.48
TRANK1O15050 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC24.29■■□□□ 1.48
TRANK1O15050 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
TRANK1O15050 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
TRANK1O15050 AC006015.1-201ENST00000429970 570 ntBASIC24.28■■□□□ 1.48
TRANK1O15050 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC24.28■■□□□ 1.48
TRANK1O15050 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC24.28■■□□□ 1.48
TRANK1O15050 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
TRANK1O15050 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC24.28■■□□□ 1.48
TRANK1O15050 GXYLT1P5-201ENST00000614548 1189 ntBASIC24.28■■□□□ 1.48
TRANK1O15050 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
TRANK1O15050 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
TRANK1O15050 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TRANK1O15050 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC24.28■■□□□ 1.48
TRANK1O15050 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TRANK1O15050 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TRANK1O15050 AC012414.1-201ENST00000556676 535 ntBASIC24.28■■□□□ 1.48
TRANK1O15050 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TRANK1O15050 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
TRANK1O15050 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms