Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PCDH17O14917 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
PCDH17O14917 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.7■■□□□ 1.06
PCDH17O14917 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDH17O14917 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDH17O14917 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
PCDH17O14917 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PCDH17O14917 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDH17O14917 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDH17O14917 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDH17O14917 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDH17O14917 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.69■■□□□ 1.06
PCDH17O14917 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDH17O14917 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.69■■□□□ 1.06
PCDH17O14917 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.69■■□□□ 1.06
PCDH17O14917 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.69■■□□□ 1.06
PCDH17O14917 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.69■■□□□ 1.06
PCDH17O14917 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDH17O14917 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.69■■□□□ 1.06
PCDH17O14917 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.69■■□□□ 1.06
PCDH17O14917 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDH17O14917 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDH17O14917 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.68■■□□□ 1.06
PCDH17O14917 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.68■■□□□ 1.06
PCDH17O14917 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDH17O14917 AL356740.2-201ENST00000601559 647 ntBASIC21.68■■□□□ 1.06
PCDH17O14917 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.68■■□□□ 1.06
PCDH17O14917 AC141586.4-201ENST00000624558 1573 ntBASIC21.68■■□□□ 1.06
PCDH17O14917 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.68■■□□□ 1.06
PCDH17O14917 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDH17O14917 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDH17O14917 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PCDH17O14917 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDH17O14917 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
PCDH17O14917 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.67■■□□□ 1.06
PCDH17O14917 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PCDH17O14917 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PCDH17O14917 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.67■■□□□ 1.06
PCDH17O14917 MIR3621-201ENST00000580529 85 ntBASIC21.67■■□□□ 1.06
PCDH17O14917 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDH17O14917 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDH17O14917 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDH17O14917 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.67■■□□□ 1.06
PCDH17O14917 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.66■■□□□ 1.06
PCDH17O14917 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.66■■□□□ 1.06
PCDH17O14917 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDH17O14917 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.66■■□□□ 1.06
PCDH17O14917 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDH17O14917 AC004448.1-201ENST00000458332 883 ntBASIC21.66■■□□□ 1.06
PCDH17O14917 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.66■■□□□ 1.06
PCDH17O14917 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDH17O14917 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDH17O14917 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
PCDH17O14917 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.66■■□□□ 1.06
PCDH17O14917 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDH17O14917 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDH17O14917 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PCDH17O14917 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.65■■□□□ 1.06
PCDH17O14917 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
PCDH17O14917 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.65■■□□□ 1.06
PCDH17O14917 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDH17O14917 AL117332.1-201ENST00000622628 974 ntBASIC21.65■■□□□ 1.06
PCDH17O14917 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDH17O14917 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDH17O14917 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.65■■□□□ 1.06
PCDH17O14917 AC004812.2-201ENST00000611079 2094 ntBASIC21.65■■□□□ 1.06
PCDH17O14917 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDH17O14917 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDH17O14917 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDH17O14917 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.64■■□□□ 1.05
PCDH17O14917 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDH17O14917 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDH17O14917 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.64■■□□□ 1.05
PCDH17O14917 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.63■■□□□ 1.05
PCDH17O14917 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDH17O14917 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDH17O14917 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDH17O14917 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.63■■□□□ 1.05
PCDH17O14917 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.63■■□□□ 1.05
PCDH17O14917 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
PCDH17O14917 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
PCDH17O14917 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCDH17O14917 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDH17O14917 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCDH17O14917 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDH17O14917 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.62■■□□□ 1.05
PCDH17O14917 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCDH17O14917 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.62■■□□□ 1.05
PCDH17O14917 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
PCDH17O14917 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDH17O14917 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
PCDH17O14917 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.62■■□□□ 1.05
PCDH17O14917 AL161729.1-201ENST00000604104 1402 ntBASIC21.62■■□□□ 1.05
PCDH17O14917 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDH17O14917 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDH17O14917 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.61■■□□□ 1.05
PCDH17O14917 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDH17O14917 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.61■■□□□ 1.05
PCDH17O14917 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDH17O14917 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms