Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.17■□□□□ 0.98
AP3D1O14617 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
AP3D1O14617 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.17■□□□□ 0.98
AP3D1O14617 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.17■□□□□ 0.98
AP3D1O14617 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
AP3D1O14617 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.17■□□□□ 0.98
AP3D1O14617 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.17■□□□□ 0.98
AP3D1O14617 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
AP3D1O14617 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
AP3D1O14617 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.17■□□□□ 0.98
AP3D1O14617 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
AP3D1O14617 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
AP3D1O14617 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
AP3D1O14617 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
AP3D1O14617 AC022616.5-201ENST00000518796 181 ntBASIC21.16■□□□□ 0.98
AP3D1O14617 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.16■□□□□ 0.98
AP3D1O14617 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
AP3D1O14617 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
AP3D1O14617 AL161729.1-201ENST00000604104 1402 ntBASIC21.15■□□□□ 0.98
AP3D1O14617 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.15■□□□□ 0.98
AP3D1O14617 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
AP3D1O14617 AC011551.1-201ENST00000614101 683 ntBASIC21.15■□□□□ 0.98
AP3D1O14617 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
AP3D1O14617 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
AP3D1O14617 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
AP3D1O14617 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.15■□□□□ 0.98
AP3D1O14617 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
AP3D1O14617 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.15■□□□□ 0.98
AP3D1O14617 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
AP3D1O14617 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.14■□□□□ 0.98
AP3D1O14617 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.98
AP3D1O14617 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.14■□□□□ 0.98
AP3D1O14617 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
AP3D1O14617 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
AP3D1O14617 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
AP3D1O14617 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
AP3D1O14617 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.14■□□□□ 0.97
AP3D1O14617 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
AP3D1O14617 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.97
AP3D1O14617 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
AP3D1O14617 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
AP3D1O14617 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
AP3D1O14617 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
AP3D1O14617 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.13■□□□□ 0.97
AP3D1O14617 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.13■□□□□ 0.97
AP3D1O14617 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
AP3D1O14617 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
AP3D1O14617 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.13■□□□□ 0.97
AP3D1O14617 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
AP3D1O14617 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
AP3D1O14617 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
AP3D1O14617 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
AP3D1O14617 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.13■□□□□ 0.97
AP3D1O14617 AC120024.1-201ENST00000562672 995 ntBASIC21.13■□□□□ 0.97
AP3D1O14617 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
AP3D1O14617 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
AP3D1O14617 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.13■□□□□ 0.97
AP3D1O14617 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
AP3D1O14617 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
AP3D1O14617 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
AP3D1O14617 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
AP3D1O14617 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
AP3D1O14617 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.12■□□□□ 0.97
AP3D1O14617 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
AP3D1O14617 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
AP3D1O14617 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
AP3D1O14617 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.12■□□□□ 0.97
AP3D1O14617 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
AP3D1O14617 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
AP3D1O14617 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.12■□□□□ 0.97
AP3D1O14617 KRT8P33-201ENST00000508125 1423 ntBASIC21.12■□□□□ 0.97
AP3D1O14617 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
AP3D1O14617 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.11■□□□□ 0.97
AP3D1O14617 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.11■□□□□ 0.97
AP3D1O14617 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
AP3D1O14617 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
AP3D1O14617 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
AP3D1O14617 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
AP3D1O14617 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
AP3D1O14617 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
AP3D1O14617 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
AP3D1O14617 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.1■□□□□ 0.97
AP3D1O14617 AC103834.1-201ENST00000520383 144 ntBASIC21.1■□□□□ 0.97
AP3D1O14617 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.1■□□□□ 0.97
AP3D1O14617 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
AP3D1O14617 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
AP3D1O14617 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
AP3D1O14617 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
AP3D1O14617 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
AP3D1O14617 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.1■□□□□ 0.97
AP3D1O14617 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.09■□□□□ 0.97
AP3D1O14617 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
AP3D1O14617 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.09■□□□□ 0.97
AP3D1O14617 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
AP3D1O14617 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.09■□□□□ 0.97
AP3D1O14617 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
AP3D1O14617 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.09■□□□□ 0.97
AP3D1O14617 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
AP3D1O14617 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.09■□□□□ 0.97
AP3D1O14617 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms