Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRRM4A7MD48 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRRM4A7MD48 C9orf163-202ENST00000624034 2573 ntBASIC18.37■□□□□ 0.53
SRRM4A7MD48 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRRM4A7MD48 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRRM4A7MD48 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC18.36■□□□□ 0.53
SRRM4A7MD48 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.36■□□□□ 0.53
SRRM4A7MD48 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.36■□□□□ 0.53
SRRM4A7MD48 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.36■□□□□ 0.53
SRRM4A7MD48 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRRM4A7MD48 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRRM4A7MD48 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRRM4A7MD48 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.36■□□□□ 0.53
SRRM4A7MD48 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.36■□□□□ 0.53
SRRM4A7MD48 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRRM4A7MD48 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SRRM4A7MD48 AC068473.5-201ENST00000616428 2072 ntBASIC18.35■□□□□ 0.53
SRRM4A7MD48 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.35■□□□□ 0.53
SRRM4A7MD48 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRRM4A7MD48 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRRM4A7MD48 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SRRM4A7MD48 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.35■□□□□ 0.53
SRRM4A7MD48 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SRRM4A7MD48 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRRM4A7MD48 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SRRM4A7MD48 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SRRM4A7MD48 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SRRM4A7MD48 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRRM4A7MD48 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRRM4A7MD48 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRRM4A7MD48 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRRM4A7MD48 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.34■□□□□ 0.53
SRRM4A7MD48 ANOS2P-203ENST00000472227 1816 ntBASIC18.34■□□□□ 0.53
SRRM4A7MD48 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRRM4A7MD48 ALDH1A3-203ENST00000557963 1670 ntBASIC18.34■□□□□ 0.53
SRRM4A7MD48 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SRRM4A7MD48 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SRRM4A7MD48 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
SRRM4A7MD48 KRT8P33-201ENST00000508125 1423 ntBASIC18.33■□□□□ 0.53
SRRM4A7MD48 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SRRM4A7MD48 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SRRM4A7MD48 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SRRM4A7MD48 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.33■□□□□ 0.52
SRRM4A7MD48 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.33■□□□□ 0.52
SRRM4A7MD48 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.33■□□□□ 0.52
SRRM4A7MD48 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SRRM4A7MD48 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SRRM4A7MD48 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SRRM4A7MD48 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRRM4A7MD48 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRRM4A7MD48 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SRRM4A7MD48 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.32■□□□□ 0.52
SRRM4A7MD48 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SRRM4A7MD48 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRRM4A7MD48 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SRRM4A7MD48 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRRM4A7MD48 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SRRM4A7MD48 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.31■□□□□ 0.52
SRRM4A7MD48 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.31■□□□□ 0.52
SRRM4A7MD48 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SRRM4A7MD48 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SRRM4A7MD48 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SRRM4A7MD48 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRRM4A7MD48 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRRM4A7MD48 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRRM4A7MD48 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRRM4A7MD48 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.31■□□□□ 0.52
SRRM4A7MD48 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC18.31■□□□□ 0.52
SRRM4A7MD48 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SRRM4A7MD48 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRRM4A7MD48 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRRM4A7MD48 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRRM4A7MD48 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.3■□□□□ 0.52
SRRM4A7MD48 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.3■□□□□ 0.52
SRRM4A7MD48 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.3■□□□□ 0.52
SRRM4A7MD48 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SRRM4A7MD48 AC103724.3-201ENST00000564481 992 ntBASIC18.3■□□□□ 0.52
SRRM4A7MD48 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SRRM4A7MD48 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRRM4A7MD48 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRRM4A7MD48 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.3■□□□□ 0.52
SRRM4A7MD48 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRRM4A7MD48 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SRRM4A7MD48 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.29■□□□□ 0.52
SRRM4A7MD48 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.29■□□□□ 0.52
SRRM4A7MD48 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SRRM4A7MD48 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SRRM4A7MD48 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SRRM4A7MD48 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SRRM4A7MD48 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SRRM4A7MD48 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SRRM4A7MD48 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SRRM4A7MD48 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.28■□□□□ 0.52
SRRM4A7MD48 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SRRM4A7MD48 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.28■□□□□ 0.52
SRRM4A7MD48 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SRRM4A7MD48 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.28■□□□□ 0.52
SRRM4A7MD48 YBX1P4-201ENST00000392794 808 ntBASIC18.28■□□□□ 0.52
SRRM4A7MD48 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SRRM4A7MD48 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms