Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CGB1A6NKQ9 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.18■□□□□ 0.5
CGB1A6NKQ9 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CGB1A6NKQ9 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC18.18■□□□□ 0.5
CGB1A6NKQ9 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CGB1A6NKQ9 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CGB1A6NKQ9 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CGB1A6NKQ9 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CGB1A6NKQ9 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CGB1A6NKQ9 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CGB1A6NKQ9 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CGB1A6NKQ9 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.17■□□□□ 0.5
CGB1A6NKQ9 AC074183.2-201ENST00000623112 922 ntBASIC18.17■□□□□ 0.5
CGB1A6NKQ9 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CGB1A6NKQ9 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.17■□□□□ 0.5
CGB1A6NKQ9 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
CGB1A6NKQ9 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CGB1A6NKQ9 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CGB1A6NKQ9 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CGB1A6NKQ9 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CGB1A6NKQ9 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CGB1A6NKQ9 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CGB1A6NKQ9 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.16■□□□□ 0.5
CGB1A6NKQ9 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CGB1A6NKQ9 C9orf163-202ENST00000624034 2573 ntBASIC18.16■□□□□ 0.5
CGB1A6NKQ9 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CGB1A6NKQ9 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CGB1A6NKQ9 AC012354.3-201ENST00000623734 483 ntBASIC18.15■□□□□ 0.5
CGB1A6NKQ9 AF131216.4-201ENST00000638924 1588 ntBASIC18.15■□□□□ 0.5
CGB1A6NKQ9 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.15■□□□□ 0.5
CGB1A6NKQ9 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CGB1A6NKQ9 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.15■□□□□ 0.5
CGB1A6NKQ9 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CGB1A6NKQ9 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CGB1A6NKQ9 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CGB1A6NKQ9 ANOS2P-203ENST00000472227 1816 ntBASIC18.14■□□□□ 0.5
CGB1A6NKQ9 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CGB1A6NKQ9 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.14■□□□□ 0.49
CGB1A6NKQ9 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CGB1A6NKQ9 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.14■□□□□ 0.49
CGB1A6NKQ9 KRT18P24-201ENST00000344739 1156 ntBASIC18.14■□□□□ 0.49
CGB1A6NKQ9 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.14■□□□□ 0.49
CGB1A6NKQ9 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CGB1A6NKQ9 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC18.14■□□□□ 0.49
CGB1A6NKQ9 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.14■□□□□ 0.49
CGB1A6NKQ9 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.14■□□□□ 0.49
CGB1A6NKQ9 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CGB1A6NKQ9 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CGB1A6NKQ9 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CGB1A6NKQ9 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CGB1A6NKQ9 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CGB1A6NKQ9 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CGB1A6NKQ9 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CGB1A6NKQ9 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CGB1A6NKQ9 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.13■□□□□ 0.49
CGB1A6NKQ9 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC18.13■□□□□ 0.49
CGB1A6NKQ9 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CGB1A6NKQ9 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CGB1A6NKQ9 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CGB1A6NKQ9 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CGB1A6NKQ9 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.13■□□□□ 0.49
CGB1A6NKQ9 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.13■□□□□ 0.49
CGB1A6NKQ9 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.13■□□□□ 0.49
CGB1A6NKQ9 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC18.13■□□□□ 0.49
CGB1A6NKQ9 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.13■□□□□ 0.49
CGB1A6NKQ9 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CGB1A6NKQ9 AL033527.3-201ENST00000566366 1196 ntBASIC18.13■□□□□ 0.49
CGB1A6NKQ9 MIR4281-201ENST00000580852 62 ntBASIC18.13■□□□□ 0.49
CGB1A6NKQ9 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CGB1A6NKQ9 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CGB1A6NKQ9 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CGB1A6NKQ9 AC012676.1-201ENST00000574705 1949 ntBASIC18.13■□□□□ 0.49
CGB1A6NKQ9 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CGB1A6NKQ9 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CGB1A6NKQ9 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CGB1A6NKQ9 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CGB1A6NKQ9 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CGB1A6NKQ9 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC18.12■□□□□ 0.49
CGB1A6NKQ9 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CGB1A6NKQ9 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CGB1A6NKQ9 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CGB1A6NKQ9 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CGB1A6NKQ9 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CGB1A6NKQ9 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CGB1A6NKQ9 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CGB1A6NKQ9 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CGB1A6NKQ9 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.11■□□□□ 0.49
CGB1A6NKQ9 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
CGB1A6NKQ9 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC18.11■□□□□ 0.49
CGB1A6NKQ9 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC18.11■□□□□ 0.49
CGB1A6NKQ9 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.11■□□□□ 0.49
CGB1A6NKQ9 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CGB1A6NKQ9 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CGB1A6NKQ9 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CGB1A6NKQ9 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.11■□□□□ 0.49
CGB1A6NKQ9 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.11■□□□□ 0.49
CGB1A6NKQ9 ALDH1A3-203ENST00000557963 1670 ntBASIC18.11■□□□□ 0.49
CGB1A6NKQ9 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.11■□□□□ 0.49
CGB1A6NKQ9 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CGB1A6NKQ9 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms