Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TVP23AA6NH52 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.27■□□□□ 0.84
TVP23AA6NH52 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.27■□□□□ 0.84
TVP23AA6NH52 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.27■□□□□ 0.84
TVP23AA6NH52 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.27■□□□□ 0.84
TVP23AA6NH52 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
TVP23AA6NH52 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TVP23AA6NH52 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TVP23AA6NH52 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
TVP23AA6NH52 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
TVP23AA6NH52 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.26■□□□□ 0.83
TVP23AA6NH52 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TVP23AA6NH52 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TVP23AA6NH52 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TVP23AA6NH52 AC004987.1-201ENST00000428627 508 ntBASIC20.26■□□□□ 0.83
TVP23AA6NH52 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
TVP23AA6NH52 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.26■□□□□ 0.83
TVP23AA6NH52 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.26■□□□□ 0.83
TVP23AA6NH52 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TVP23AA6NH52 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TVP23AA6NH52 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TVP23AA6NH52 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.26■□□□□ 0.83
TVP23AA6NH52 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TVP23AA6NH52 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TVP23AA6NH52 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.25■□□□□ 0.83
TVP23AA6NH52 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
TVP23AA6NH52 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TVP23AA6NH52 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
TVP23AA6NH52 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.25■□□□□ 0.83
TVP23AA6NH52 AC019171.1-201ENST00000601251 1056 ntBASIC20.25■□□□□ 0.83
TVP23AA6NH52 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
TVP23AA6NH52 AC131274.2-201ENST00000580697 1507 ntBASIC20.25■□□□□ 0.83
TVP23AA6NH52 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TVP23AA6NH52 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TVP23AA6NH52 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.24■□□□□ 0.83
TVP23AA6NH52 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TVP23AA6NH52 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
TVP23AA6NH52 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TVP23AA6NH52 ATP5G2P3-201ENST00000429083 425 ntBASIC20.24■□□□□ 0.83
TVP23AA6NH52 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TVP23AA6NH52 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TVP23AA6NH52 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TVP23AA6NH52 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TVP23AA6NH52 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
TVP23AA6NH52 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.23■□□□□ 0.83
TVP23AA6NH52 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
TVP23AA6NH52 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TVP23AA6NH52 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TVP23AA6NH52 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
TVP23AA6NH52 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TVP23AA6NH52 AC022616.5-201ENST00000518796 181 ntBASIC20.23■□□□□ 0.83
TVP23AA6NH52 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TVP23AA6NH52 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.23■□□□□ 0.83
TVP23AA6NH52 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TVP23AA6NH52 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TVP23AA6NH52 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TVP23AA6NH52 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TVP23AA6NH52 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.22■□□□□ 0.83
TVP23AA6NH52 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.22■□□□□ 0.83
TVP23AA6NH52 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TVP23AA6NH52 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TVP23AA6NH52 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.22■□□□□ 0.83
TVP23AA6NH52 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
TVP23AA6NH52 PVT1_1.1-201ENST00000615125 194 ntBASIC20.22■□□□□ 0.83
TVP23AA6NH52 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
TVP23AA6NH52 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TVP23AA6NH52 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TVP23AA6NH52 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TVP23AA6NH52 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.21■□□□□ 0.83
TVP23AA6NH52 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TVP23AA6NH52 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TVP23AA6NH52 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TVP23AA6NH52 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
TVP23AA6NH52 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TVP23AA6NH52 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TVP23AA6NH52 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.21■□□□□ 0.83
TVP23AA6NH52 AC120024.1-201ENST00000562672 995 ntBASIC20.21■□□□□ 0.83
TVP23AA6NH52 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.21■□□□□ 0.83
TVP23AA6NH52 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TVP23AA6NH52 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.21■□□□□ 0.83
TVP23AA6NH52 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TVP23AA6NH52 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TVP23AA6NH52 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
TVP23AA6NH52 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TVP23AA6NH52 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TVP23AA6NH52 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.21■□□□□ 0.83
TVP23AA6NH52 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TVP23AA6NH52 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TVP23AA6NH52 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.2■□□□□ 0.82
TVP23AA6NH52 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
TVP23AA6NH52 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.2■□□□□ 0.82
TVP23AA6NH52 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TVP23AA6NH52 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
TVP23AA6NH52 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TVP23AA6NH52 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TVP23AA6NH52 AC010980.1-201ENST00000587192 1142 ntBASIC20.2■□□□□ 0.82
TVP23AA6NH52 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
TVP23AA6NH52 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
TVP23AA6NH52 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.2■□□□□ 0.82
TVP23AA6NH52 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms