Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CCDC196A0A1B0GTZ2 TRIR-205ENST00000592273 783 ntTSL 3 BASIC26.54■■□□□ 1.84
CCDC196A0A1B0GTZ2 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC26.54■■□□□ 1.84
CCDC196A0A1B0GTZ2 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
CCDC196A0A1B0GTZ2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CCDC196A0A1B0GTZ2 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CCDC196A0A1B0GTZ2 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
CCDC196A0A1B0GTZ2 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
CCDC196A0A1B0GTZ2 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
CCDC196A0A1B0GTZ2 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CCDC196A0A1B0GTZ2 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CCDC196A0A1B0GTZ2 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC26.52■■□□□ 1.84
CCDC196A0A1B0GTZ2 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CCDC196A0A1B0GTZ2 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
CCDC196A0A1B0GTZ2 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CCDC196A0A1B0GTZ2 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC26.52■■□□□ 1.84
CCDC196A0A1B0GTZ2 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC26.52■■□□□ 1.84
CCDC196A0A1B0GTZ2 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC26.52■■□□□ 1.84
CCDC196A0A1B0GTZ2 MTDHP2-201ENST00000601468 714 ntBASIC26.52■■□□□ 1.84
CCDC196A0A1B0GTZ2 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
CCDC196A0A1B0GTZ2 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC26.52■■□□□ 1.84
CCDC196A0A1B0GTZ2 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
CCDC196A0A1B0GTZ2 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CCDC196A0A1B0GTZ2 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CCDC196A0A1B0GTZ2 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CCDC196A0A1B0GTZ2 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CCDC196A0A1B0GTZ2 CREM-229ENST00000474362 1030 ntTSL 2 BASIC26.51■■□□□ 1.83
CCDC196A0A1B0GTZ2 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CCDC196A0A1B0GTZ2 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CCDC196A0A1B0GTZ2 TSPY9P-201ENST00000440215 945 ntBASIC26.5■■□□□ 1.83
CCDC196A0A1B0GTZ2 TSPY11P-201ENST00000442607 1045 ntBASIC26.5■■□□□ 1.83
CCDC196A0A1B0GTZ2 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CCDC196A0A1B0GTZ2 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
CCDC196A0A1B0GTZ2 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CCDC196A0A1B0GTZ2 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
CCDC196A0A1B0GTZ2 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CCDC196A0A1B0GTZ2 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CCDC196A0A1B0GTZ2 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC26.49■■□□□ 1.83
CCDC196A0A1B0GTZ2 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CCDC196A0A1B0GTZ2 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC26.49■■□□□ 1.83
CCDC196A0A1B0GTZ2 AC005703.6-201ENST00000623265 1329 ntBASIC26.49■■□□□ 1.83
CCDC196A0A1B0GTZ2 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CCDC196A0A1B0GTZ2 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC26.49■■□□□ 1.83
CCDC196A0A1B0GTZ2 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC26.49■■□□□ 1.83
CCDC196A0A1B0GTZ2 AC010997.5-201ENST00000609182 354 ntBASIC26.49■■□□□ 1.83
CCDC196A0A1B0GTZ2 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
CCDC196A0A1B0GTZ2 GUSBP5-201ENST00000418136 578 ntBASIC26.48■■□□□ 1.83
CCDC196A0A1B0GTZ2 EXOG-217ENST00000630638 197 ntTSL 5 BASIC26.48■■□□□ 1.83
CCDC196A0A1B0GTZ2 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CCDC196A0A1B0GTZ2 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CCDC196A0A1B0GTZ2 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CCDC196A0A1B0GTZ2 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
CCDC196A0A1B0GTZ2 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CCDC196A0A1B0GTZ2 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CCDC196A0A1B0GTZ2 CLTA-206ENST00000466396 695 ntTSL 2 BASIC26.47■■□□□ 1.83
CCDC196A0A1B0GTZ2 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CCDC196A0A1B0GTZ2 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CCDC196A0A1B0GTZ2 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CCDC196A0A1B0GTZ2 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC26.47■■□□□ 1.83
CCDC196A0A1B0GTZ2 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CCDC196A0A1B0GTZ2 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CCDC196A0A1B0GTZ2 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CCDC196A0A1B0GTZ2 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CCDC196A0A1B0GTZ2 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CCDC196A0A1B0GTZ2 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC26.46■■□□□ 1.83
CCDC196A0A1B0GTZ2 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
CCDC196A0A1B0GTZ2 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
CCDC196A0A1B0GTZ2 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
CCDC196A0A1B0GTZ2 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
CCDC196A0A1B0GTZ2 UNC93B8-201ENST00000511903 705 ntBASIC26.45■■□□□ 1.82
CCDC196A0A1B0GTZ2 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC26.45■■□□□ 1.82
CCDC196A0A1B0GTZ2 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC26.45■■□□□ 1.82
CCDC196A0A1B0GTZ2 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CCDC196A0A1B0GTZ2 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CCDC196A0A1B0GTZ2 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CCDC196A0A1B0GTZ2 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC26.44■■□□□ 1.82
CCDC196A0A1B0GTZ2 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
CCDC196A0A1B0GTZ2 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC26.44■■□□□ 1.82
CCDC196A0A1B0GTZ2 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
CCDC196A0A1B0GTZ2 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CCDC196A0A1B0GTZ2 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CCDC196A0A1B0GTZ2 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
CCDC196A0A1B0GTZ2 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC26.43■■□□□ 1.82
CCDC196A0A1B0GTZ2 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC26.43■■□□□ 1.82
CCDC196A0A1B0GTZ2 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC26.43■■□□□ 1.82
CCDC196A0A1B0GTZ2 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC26.43■■□□□ 1.82
CCDC196A0A1B0GTZ2 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CCDC196A0A1B0GTZ2 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC26.42■■□□□ 1.82
CCDC196A0A1B0GTZ2 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC26.42■■□□□ 1.82
CCDC196A0A1B0GTZ2 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC26.42■■□□□ 1.82
CCDC196A0A1B0GTZ2 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
CCDC196A0A1B0GTZ2 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC26.42■■□□□ 1.82
CCDC196A0A1B0GTZ2 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
CCDC196A0A1B0GTZ2 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CCDC196A0A1B0GTZ2 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
CCDC196A0A1B0GTZ2 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CCDC196A0A1B0GTZ2 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC26.42■■□□□ 1.82
CCDC196A0A1B0GTZ2 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CCDC196A0A1B0GTZ2 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
CCDC196A0A1B0GTZ2 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms