Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF103-CHMP3A0A140T963 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.8■■□□□ 1.08
RNF103-CHMP3A0A140T963 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF103-CHMP3A0A140T963 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
RNF103-CHMP3A0A140T963 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.8■■□□□ 1.08
RNF103-CHMP3A0A140T963 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.8■■□□□ 1.08
RNF103-CHMP3A0A140T963 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
RNF103-CHMP3A0A140T963 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
RNF103-CHMP3A0A140T963 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF103-CHMP3A0A140T963 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.79■■□□□ 1.08
RNF103-CHMP3A0A140T963 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
RNF103-CHMP3A0A140T963 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
RNF103-CHMP3A0A140T963 KRT18P60-201ENST00000312876 1297 ntBASIC21.79■■□□□ 1.08
RNF103-CHMP3A0A140T963 AL592295.1-201ENST00000400984 884 ntBASIC21.79■■□□□ 1.08
RNF103-CHMP3A0A140T963 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF103-CHMP3A0A140T963 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.79■■□□□ 1.08
RNF103-CHMP3A0A140T963 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF103-CHMP3A0A140T963 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF103-CHMP3A0A140T963 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.79■■□□□ 1.08
RNF103-CHMP3A0A140T963 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
RNF103-CHMP3A0A140T963 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF103-CHMP3A0A140T963 AC090877.2-201ENST00000558441 1738 ntBASIC21.78■■□□□ 1.08
RNF103-CHMP3A0A140T963 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.78■■□□□ 1.08
RNF103-CHMP3A0A140T963 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF103-CHMP3A0A140T963 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RNF103-CHMP3A0A140T963 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.78■■□□□ 1.08
RNF103-CHMP3A0A140T963 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF103-CHMP3A0A140T963 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RNF103-CHMP3A0A140T963 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
RNF103-CHMP3A0A140T963 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.78■■□□□ 1.08
RNF103-CHMP3A0A140T963 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF103-CHMP3A0A140T963 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.77■■□□□ 1.08
RNF103-CHMP3A0A140T963 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF103-CHMP3A0A140T963 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
RNF103-CHMP3A0A140T963 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF103-CHMP3A0A140T963 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RNF103-CHMP3A0A140T963 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.77■■□□□ 1.08
RNF103-CHMP3A0A140T963 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF103-CHMP3A0A140T963 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.77■■□□□ 1.08
RNF103-CHMP3A0A140T963 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF103-CHMP3A0A140T963 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
RNF103-CHMP3A0A140T963 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.77■■□□□ 1.07
RNF103-CHMP3A0A140T963 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RNF103-CHMP3A0A140T963 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF103-CHMP3A0A140T963 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF103-CHMP3A0A140T963 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF103-CHMP3A0A140T963 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF103-CHMP3A0A140T963 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF103-CHMP3A0A140T963 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.76■■□□□ 1.07
RNF103-CHMP3A0A140T963 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
RNF103-CHMP3A0A140T963 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF103-CHMP3A0A140T963 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF103-CHMP3A0A140T963 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF103-CHMP3A0A140T963 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.75■■□□□ 1.07
RNF103-CHMP3A0A140T963 ABHD17AP5-201ENST00000580133 923 ntBASIC21.75■■□□□ 1.07
RNF103-CHMP3A0A140T963 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RNF103-CHMP3A0A140T963 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
RNF103-CHMP3A0A140T963 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
RNF103-CHMP3A0A140T963 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF103-CHMP3A0A140T963 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.75■■□□□ 1.07
RNF103-CHMP3A0A140T963 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF103-CHMP3A0A140T963 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RNF103-CHMP3A0A140T963 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RNF103-CHMP3A0A140T963 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RNF103-CHMP3A0A140T963 LONRF2P2-201ENST00000439212 571 ntBASIC21.74■■□□□ 1.07
RNF103-CHMP3A0A140T963 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RNF103-CHMP3A0A140T963 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.74■■□□□ 1.07
RNF103-CHMP3A0A140T963 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.74■■□□□ 1.07
RNF103-CHMP3A0A140T963 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RNF103-CHMP3A0A140T963 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.73■■□□□ 1.07
RNF103-CHMP3A0A140T963 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.73■■□□□ 1.07
RNF103-CHMP3A0A140T963 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF103-CHMP3A0A140T963 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RNF103-CHMP3A0A140T963 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.73■■□□□ 1.07
RNF103-CHMP3A0A140T963 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF103-CHMP3A0A140T963 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RNF103-CHMP3A0A140T963 AC233723.2-201ENST00000623798 2106 ntBASIC21.73■■□□□ 1.07
RNF103-CHMP3A0A140T963 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF103-CHMP3A0A140T963 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF103-CHMP3A0A140T963 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.72■■□□□ 1.07
RNF103-CHMP3A0A140T963 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF103-CHMP3A0A140T963 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RNF103-CHMP3A0A140T963 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.72■■□□□ 1.07
RNF103-CHMP3A0A140T963 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF103-CHMP3A0A140T963 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF103-CHMP3A0A140T963 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.72■■□□□ 1.07
RNF103-CHMP3A0A140T963 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF103-CHMP3A0A140T963 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RNF103-CHMP3A0A140T963 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.72■■□□□ 1.07
RNF103-CHMP3A0A140T963 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF103-CHMP3A0A140T963 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF103-CHMP3A0A140T963 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RNF103-CHMP3A0A140T963 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.72■■□□□ 1.07
RNF103-CHMP3A0A140T963 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF103-CHMP3A0A140T963 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF103-CHMP3A0A140T963 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.71■■□□□ 1.07
RNF103-CHMP3A0A140T963 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF103-CHMP3A0A140T963 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF103-CHMP3A0A140T963 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
RNF103-CHMP3A0A140T963 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms