Protein–RNA interactions for Protein: A0A0U1RRI6

CENPVL3, Centromere protein V-like 3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPVL3A0A0U1RRI6 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CENPVL3A0A0U1RRI6 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CENPVL3A0A0U1RRI6 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CENPVL3A0A0U1RRI6 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.54■□□□□ 0.56
CENPVL3A0A0U1RRI6 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CENPVL3A0A0U1RRI6 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CENPVL3A0A0U1RRI6 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CENPVL3A0A0U1RRI6 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.54■□□□□ 0.56
CENPVL3A0A0U1RRI6 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CENPVL3A0A0U1RRI6 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CENPVL3A0A0U1RRI6 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CENPVL3A0A0U1RRI6 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CENPVL3A0A0U1RRI6 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CENPVL3A0A0U1RRI6 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CENPVL3A0A0U1RRI6 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CENPVL3A0A0U1RRI6 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.53■□□□□ 0.56
CENPVL3A0A0U1RRI6 AC009102.2-201ENST00000606772 1639 ntBASIC18.52■□□□□ 0.56
CENPVL3A0A0U1RRI6 UNC93B3-201ENST00000308076 687 ntBASIC18.52■□□□□ 0.56
CENPVL3A0A0U1RRI6 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.52■□□□□ 0.56
CENPVL3A0A0U1RRI6 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.52■□□□□ 0.56
CENPVL3A0A0U1RRI6 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CENPVL3A0A0U1RRI6 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.52■□□□□ 0.56
CENPVL3A0A0U1RRI6 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CENPVL3A0A0U1RRI6 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
CENPVL3A0A0U1RRI6 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CENPVL3A0A0U1RRI6 ALDH1A3-203ENST00000557963 1670 ntBASIC18.51■□□□□ 0.55
CENPVL3A0A0U1RRI6 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CENPVL3A0A0U1RRI6 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.51■□□□□ 0.55
CENPVL3A0A0U1RRI6 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CENPVL3A0A0U1RRI6 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CENPVL3A0A0U1RRI6 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CENPVL3A0A0U1RRI6 PBX2P1-201ENST00000493219 1291 ntBASIC18.51■□□□□ 0.55
CENPVL3A0A0U1RRI6 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CENPVL3A0A0U1RRI6 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CENPVL3A0A0U1RRI6 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
CENPVL3A0A0U1RRI6 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CENPVL3A0A0U1RRI6 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CENPVL3A0A0U1RRI6 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CENPVL3A0A0U1RRI6 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.5■□□□□ 0.55
CENPVL3A0A0U1RRI6 AC133561.4-201ENST00000566112 224 ntBASIC18.5■□□□□ 0.55
CENPVL3A0A0U1RRI6 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
CENPVL3A0A0U1RRI6 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CENPVL3A0A0U1RRI6 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CENPVL3A0A0U1RRI6 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CENPVL3A0A0U1RRI6 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CENPVL3A0A0U1RRI6 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CENPVL3A0A0U1RRI6 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.49■□□□□ 0.55
CENPVL3A0A0U1RRI6 AC005837.3-201ENST00000612163 286 ntBASIC18.49■□□□□ 0.55
CENPVL3A0A0U1RRI6 AC106739.1-201ENST00000617035 715 ntBASIC18.49■□□□□ 0.55
CENPVL3A0A0U1RRI6 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.49■□□□□ 0.55
CENPVL3A0A0U1RRI6 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CENPVL3A0A0U1RRI6 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CENPVL3A0A0U1RRI6 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CENPVL3A0A0U1RRI6 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CENPVL3A0A0U1RRI6 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CENPVL3A0A0U1RRI6 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.49■□□□□ 0.55
CENPVL3A0A0U1RRI6 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC18.48■□□□□ 0.55
CENPVL3A0A0U1RRI6 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CENPVL3A0A0U1RRI6 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CENPVL3A0A0U1RRI6 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CENPVL3A0A0U1RRI6 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.48■□□□□ 0.55
CENPVL3A0A0U1RRI6 AL136162.1-201ENST00000607711 1078 ntBASIC18.48■□□□□ 0.55
CENPVL3A0A0U1RRI6 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.48■□□□□ 0.55
CENPVL3A0A0U1RRI6 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.48■□□□□ 0.55
CENPVL3A0A0U1RRI6 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CENPVL3A0A0U1RRI6 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.48■□□□□ 0.55
CENPVL3A0A0U1RRI6 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CENPVL3A0A0U1RRI6 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CENPVL3A0A0U1RRI6 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.47■□□□□ 0.55
CENPVL3A0A0U1RRI6 EED-207ENST00000528180 1745 ntTSL 5 BASIC18.47■□□□□ 0.55
CENPVL3A0A0U1RRI6 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CENPVL3A0A0U1RRI6 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.47■□□□□ 0.55
CENPVL3A0A0U1RRI6 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CENPVL3A0A0U1RRI6 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.47■□□□□ 0.55
CENPVL3A0A0U1RRI6 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CENPVL3A0A0U1RRI6 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.47■□□□□ 0.55
CENPVL3A0A0U1RRI6 DUX4L19-201ENST00000557448 1267 ntBASIC18.47■□□□□ 0.55
CENPVL3A0A0U1RRI6 AC092171.4-201ENST00000609130 632 ntBASIC18.47■□□□□ 0.55
CENPVL3A0A0U1RRI6 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.47■□□□□ 0.55
CENPVL3A0A0U1RRI6 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CENPVL3A0A0U1RRI6 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CENPVL3A0A0U1RRI6 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CENPVL3A0A0U1RRI6 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CENPVL3A0A0U1RRI6 C17orf82-201ENST00000623772 1530 ntBASIC18.46■□□□□ 0.55
CENPVL3A0A0U1RRI6 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CENPVL3A0A0U1RRI6 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.46■□□□□ 0.55
CENPVL3A0A0U1RRI6 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CENPVL3A0A0U1RRI6 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CENPVL3A0A0U1RRI6 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
CENPVL3A0A0U1RRI6 AC135279.3-201ENST00000610945 1311 ntBASIC18.46■□□□□ 0.55
CENPVL3A0A0U1RRI6 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CENPVL3A0A0U1RRI6 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CENPVL3A0A0U1RRI6 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CENPVL3A0A0U1RRI6 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CENPVL3A0A0U1RRI6 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CENPVL3A0A0U1RRI6 AC024257.2-201ENST00000549699 147 ntBASIC18.45■□□□□ 0.54
CENPVL3A0A0U1RRI6 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.45■□□□□ 0.54
CENPVL3A0A0U1RRI6 AC099791.2-201ENST00000605725 427 ntBASIC18.45■□□□□ 0.54
CENPVL3A0A0U1RRI6 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CENPVL3A0A0U1RRI6 SYT6-210ENST00000641643 1587 ntBASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms